- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.2661595-2673828.18749.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
R48 [2,661,594 / 2,670,161]
Amino acid sequence
Length: 366
>Cisavi.CG.ENS81.R48.2661595-2673828.18749.p
MMDSDKSLEDMSQKEKEKFARENHSEIERRRRNKMTAYITELSDMVPSCSALARKPDKLT
ILRMAVSHMKQLRGAMGGGVENNYKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVFVS
DTVTAVLSQAHSDWNNHLLYDLVHPDDVEKVKEQLCVSESQNTGRILDLKTGTVKKEGQQ
SSVRMCMGSRRAFICRMRCGKSQLTSHMSSTRHYRAVNTLGPADDSKMAYAVTHVTGFIR
AWPPAGFGSDAQNDGLDDVSLGGTAGNYCLVAVARLQITSHPTFCEVNSNQDHSEFVSRH
SSDGTFTFVDLRVTSVLGYQPQDLLMKLPSEFYHPEDIEHMKESFKQVIVMKGQVISMMY
RFRSQS
Nucleotide sequence
Length: 1,159
>Cisavi.CG.ENS81.R48.2661595-2673828.18749.t
GTCGGATAGAATATTGACAACTTATTGAAAAAACTGATCAAACCGTGGATCTGTATTTGC
AATGATGGACTCAGACAAATCCCTTGAAGATATGTCTCAGAAGGAAAAGGAAAAGTTCGC
TCGTGAAAATCACTCTGAGATAGAGAGAAGGCGACGCAACAAAATGACGGCCTACATCAC
CGAGCTCTCCGACATGGTGCCTTCATGCAGTGCTTTGGCCAGGAAGCCTGACAAGTTGAC
GATCCTAAGAATGGCAGTGTCTCACATGAAACAACTAAGAGGCGCTATGGGTGGTGGGGT
GGAGAATAATTATAAGCCTTCCTTTCTAACTGACCAGGAGTTAAAACACCTTGTGTTGGA
AGCTGCCGATGGGTTCTTGTTTGTCACTGCTTGTGATTCAAGTCAAGTAGTTTTTGTTTC
AGACACAGTTACTGCTGTCTTGAGCCAGGCTCACTCAGACTGGAACAACCACCTGCTCTA
TGACCTTGTACATCCTGATGATGTAGAAAAGGTAAAAGAACAACTTTGTGTCTCGGAATC
TCAAAACACAGGTCGGATACTTGACTTGAAGACAGGAACAGTGAAGAAAGAAGGGCAGCA
AAGCTCCGTGCGGATGTGTATGGGTTCCCGTAGAGCCTTTATTTGCCGAATGAGATGTGG
CAAGTCCCAACTCACAAGTCATATGTCCTCGACAAGGCACTACCGTGCAGTCAACACCCT
TGGTCCCGCTGACGACAGTAAAATGGCTTACGCCGTGACCCATGTAACTGGTTTCATCCG
TGCCTGGCCCCCAGCTGGTTTCGGCTCGGATGCGCAAAATGACGGCTTGGACGACGTCTC
TCTCGGAGGAACAGCCGGGAATTATTGCTTAGTCGCCGTGGCGAGACTGCAGATAACAAG
CCACCCGACGTTTTGCGAGGTGAATTCCAACCAGGATCACTCGGAGTTCGTATCTCGTCA
CAGCTCAGATGGGACTTTCACCTTTGTTGATCTCAGGGTGACCAGTGTGTTGGGCTACCA
ACCACAGGATCTGCTGATGAAACTGCCATCTGAGTTCTACCACCCCGAGGATATAGAACA
CATGAAAGAGAGTTTCAAACAAGTCATAGTCATGAAAGGACAGGTGATCTCCATGATGTA
TAGGTTTCGTTCGCAGTCG
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[8-75] 4.5E-22 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[19-72] 16.971 |
| Pfam |
bHLH_dom (IPR011598) - T[21-72] 3.5E-15 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[21-103] 1.7E-15 |
| CDD |
bHLH_dom (IPR011598) - T[21-73] 1.35162E-14 |
| SMART |
bHLH_dom (IPR011598) - T[25-78] 3.0E-13 |
| PRINTS |
Nuc_translocat (IPR001067) - T[34-49] 3.8E-78 - T[54-74] 3.8E-78 - T[84-107] 3.8E-78 - T[109-128] 3.8E-78 - T[141-159] 3.8E-78 - T[187-200] 3.8E-78 - T[230-249] 3.8E-78 - T[295-312] 3.8E-78 |
| ProSiteProfiles |
PAS (IPR000014) - T[91-164] 9.717 - T[301-352] 13.001 |
| SMART |
PAS (IPR000014) - T[93-160] 0.008 - T[282-350] 1.4E-5 |
| Pfam |
PAS_fold (IPR013767) - T[97-199] 4.3E-8 |
| CDD |
PAS (IPR000014) - T[102-191] 6.9842E-6 - T[294-366] 3.79296E-9 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[103-157] 3.59E-9 - T[184-205] 3.59E-9 - T[295-364] 1.54E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 59.178 % | 446 | 7.71E-152 |
| ARNT2_HUMAN | 61.157 % | 456 | 1.49E-156 |
| BMAL1_HUMAN | 40.811 % | 291 | 1.52E-93 |