Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,849

>Cisavi.CG.ENS81.R48.269788-290584.09149.p
ATYMIHVHPVDCSTSSVVESISCTKRTTAAEVVAKVTRKLGIENGLSYVLVEMHKDRGEE
MILAQSDLPVQRMLLWPTQFQHSYKFVLRETDESGSVMYHGANSWHEKAERVSTERDMAS
KGFLPPSKLSDSDCPDLCAISSLSQNKILEILRKRFLKDKIYTYSADTLISINPYKFMPI
YNPKYMTLYQNRRKEDLEPHIYAIADTAFNTMVQTKQNQCIVITGKSGSGKTQATHFLVH
HSLALCQKSYMTGVENMLTGAGPVLEAFGNAQTEHNNNSSRFGKFLKIHFYGSGLLSGAD
VQTYLLEKSRLVHQEPNEKNFHIFYYLLYGTSPEELKEIYLDQNTNYNYLKQCSKHANTD
APAELERLRQAMEVMGFYIGAQRSIFRLIAAIILLGNITFKMKSGRDETLEIQDESYLTS
VSLLLGLDKNVVRKCLLTRKAKAGAGERFVLSLKLEEARATRDAMSKALYQSLFDWAVSS
VNMALAQKTRDTKLKSQSQWIGLLDIFGFEDFVKNSFEQFCINYASEHLQHYCIKHTFQL
EQEEYRAEGLTWKEVDYADNSGCLLLYEKKITGLFHLIDENFPGANNHTLLSQFNRVHGN
TRYYDTTVVKEDAFMIVHYAGKVKYQIKDFREKNHDQVREDLITLVRTSQSSFIQGIVSK
SPAAVVRWGVLRAIVRAMFAFKNAGKKTLRKFFSYFFLPVTIFTSARIWQTFICRAGHNH
LKKIFVFEATTNFKYKDIICVKPSRMARLSLHQTGVAQSLSGSESPRETSFYGRRKVNAT
SRGRKKTNSITQQYQASLSLLMSTLEQAHPFFVRCIQPNSKKVPLKVDEKLVLHQLRCSG
LLQTIQLHQTRYPERMTGAAFATQFKLLLPQSNATLPEIKNFLLKIRLQPGTDFQIGKTQ
IFLRDHASRVLKESLHRVVLKHVILLQSRIRGYLARRSYCQQRAAAVQIQSYWRMSYRIK
KKQRSNAALLIQRNYRGHRSRLLYRTLKLEKMDEQRQSWPIYSSASKKEQTIDDKSDETS
PCMSPPNRTPQFNDTNNNHDISDKLKGTIDSPEPQATPPVDKTPFRARTKAGELFLKAAY
PPNKIVVVKPVVYVPSSKRKQYDDETDYAKSYSLKPSVKTQDTGNFMYTTSPSKIDTEME
AAAPVQDKQAEKNTSDLKPTDHPLNGEIAETNYLTRAHSESGSPSSGWSNRGSSSISTGP
VIPNKPNSVPTKVEKLVPDKKSETSKNEDLATTSQPTVPSFARSVSMERYYLNRGRQFYL
KLNITTVTHSVALSKPRRQRSNSAIETYMASKVQPPSTDPVARKSASLSAEAFAKKCMQE
QFLMFSSLQEKASIPQYAPLHDSDQETHHHQHTVNHLVLKCHIKYYACNITEDLTDGGKR
GSAFIEAVRKTFWGSSRGQSRTHPTLAERKSNDSAISANDAVNIRSLEEEKFSPKLLVSS
ADVLLLLDDFIKSKTSSFNGEHLVDQVFKISLNEFCANLTALYSFATLSGDTNGLRYKDI
VSNFRQVLEKTANHYSLDQYAAMMGVNGFRGYMNEFMNDVLPKYTAREAKSKRKKGKDDS
EKLGHHFTGVQWGITQVCEFCNNVMWLMEAGLMCKICKFACHKKCFKQLTTRCPGSTEVD
KLKSKPKKLFGESLASLASKESSVPTFIDKCISYMEMNGIYQEGIYRKSAAVAQNKLLEE
SLNKDIECQKVNFDDYNIHCVASCFKKFLRSLPSPLVPYDKYFEFLQAARITKEREKVNA
LYHVLEGIPRQNHATLERIVFHLARVAQQEPTNRMSPSNLAIVFTPCFFAAPPHVSPIEA
AEQVGDMTKAVECVISEQVKKIRSTLESISEIQSAESSTNERLKQIRQS

Nucleotide sequence

Length: 5,547

>Cisavi.CG.ENS81.R48.269788-290584.09149.t
GCAACATATATGATTCATGTCCACCCAGTTGACTGTTCAACATCTTCTGTTGTGGAATCT
ATATCTTGCACCAAGCGTACCACAGCTGCTGAAGTTGTTGCAAAAGTGACAAGGAAATTG
GGAATTGAAAATGGTCTTTCATACGTTCTTGTCGAGATGCACAAAGACAGGGGAGAAGAG
ATGATTTTAGCCCAGTCTGATTTACCAGTGCAAAGAATGCTTCTCTGGCCGACACAGTTT
CAGCATTCATATAAGTTTGTGTTGAGAGAAACAGATGAAAGTGGGAGTGTAATGTATCAC
GGCGCAAACTCATGGCACGAAAAAGCAGAGAGGGTCTCTACAGAACGAGACATGGCCTCC
AAAGGTTTCTTGCCACCCTCAAAACTATCAGACTCCGATTGTCCTGATCTTTGCGCTATT
TCTTCCTTATCACAAAATAAGATTTTAGAAATCTTACGAAAACGGTTTTTAAAAGACAAA
ATCTACACCTACTCAGCTGACACCTTAATTTCAATTAACCCTTACAAATTTATGCCGATT
TACAACCCTAAGTACATGACTTTGTACCAAAATCGCCGGAAAGAGGACTTGGAACCGCAC
ATTTATGCAATTGCCGACACTGCATTTAACACAATGGTACAAACAAAGCAAAACCAATGC
ATAGTGATCACAGGAAAATCAGGATCAGGAAAGACACAAGCCACTCACTTCCTTGTACAC
CACTCCCTTGCACTCTGTCAAAAAAGTTACATGACTGGCGTAGAAAACATGCTAACAGGG
GCTGGTCCTGTGTTAGAGGCTTTTGGAAATGCTCAAACCGAACACAATAATAATAGCAGT
AGATTTGGAAAATTTCTGAAGATTCATTTTTATGGAAGTGGTTTATTATCAGGTGCCGAT
GTTCAGACTTATTTGCTGGAGAAGTCCAGACTGGTACATCAAGAACCAAATGAAAAGAAT
TTCCATATATTCTACTACCTACTTTATGGCACCTCTCCTGAAGAATTGAAGGAAATCTAC
CTAGATCAAAACACTAACTACAATTACTTGAAACAGTGCAGCAAACATGCGAACACTGAT
GCACCTGCTGAGTTGGAGAGGTTAAGGCAAGCAATGGAAGTAATGGGGTTTTACATTGGT
GCCCAGCGCAGTATCTTCCGACTTATTGCTGCCATTATATTGCTGGGAAATATTACTTTC
AAAATGAAATCTGGCCGTGATGAAACACTAGAAATACAAGACGAAAGTTATCTAACCAGC
GTTAGTTTGTTGCTTGGACTGGATAAGAATGTTGTTCGTAAATGTTTGCTGACGAGGAAA
GCGAAAGCTGGTGCTGGGGAACGTTTCGTCTTATCACTTAAACTTGAAGAGGCAAGAGCA
ACTCGTGATGCAATGTCCAAAGCGTTGTATCAAAGTTTATTTGACTGGGCTGTGAGTAGT
GTGAACATGGCACTGGCTCAGAAAACCAGAGACACAAAACTGAAATCGCAGAGCCAATGG
ATAGGTCTCCTTGATATTTTTGGCTTTGAAGATTTTGTCAAAAACAGCTTTGAGCAGTTC
TGTATCAACTATGCTAGTGAGCATCTACAACACTATTGCATAAAACATACATTTCAGCTG
GAACAGGAAGAATACAGAGCAGAAGGATTGACTTGGAAAGAGGTTGATTATGCTGATAAC
TCTGGTTGCTTGCTTTTATATGAGAAGAAAATAACTGGCTTGTTTCATTTGATAGATGAA
AATTTCCCTGGTGCCAACAACCACACTTTACTCTCCCAATTCAATCGAGTTCATGGTAAC
ACCCGGTACTATGACACCACTGTTGTTAAAGAGGATGCCTTTATGATTGTACATTATGCT
GGCAAAGTGAAATACCAGATCAAGGATTTCCGTGAGAAAAACCACGACCAAGTGCGAGAA
GACCTGATCACTCTGGTACGAACCTCTCAGTCCAGTTTCATCCAGGGAATTGTTTCCAAA
TCCCCCGCTGCTGTTGTTCGCTGGGGAGTCCTGCGTGCCATCGTGCGTGCTATGTTTGCT
TTTAAAAATGCCGGGAAGAAAACTTTACGTAAGTTTTTCAGTTATTTCTTTTTACCAGTG
ACCATTTTTACTTCTGCCCGAATTTGGCAAACTTTTATTTGCCGTGCTGGTCATAATCAC
CTGAAAAAAATATTTGTTTTCGAGGCAACGACCAATTTCAAATACAAAGACATAATATGT
GTGAAACCTTCCAGGATGGCCCGACTCTCTCTTCATCAAACTGGTGTTGCGCAATCCCTT
AGCGGGTCCGAATCGCCAAGGGAAACCAGTTTCTACGGAAGAAGAAAGGTCAACGCAACA
TCCAGAGGAAGGAAGAAGACCAACAGCATCACTCAGCAGTATCAGGCATCACTTAGCTTG
CTAATGTCAACACTGGAGCAAGCACACCCATTCTTTGTTCGATGTATACAGCCTAATAGT
AAAAAGGTTCCATTGAAGGTGGATGAGAAGTTGGTTCTCCACCAGCTTCGTTGCTCAGGT
CTCCTCCAAACCATCCAACTCCACCAAACCCGATATCCTGAGCGAATGACTGGTGCTGCA
TTTGCTACTCAATTCAAGTTACTGCTGCCACAAAGCAACGCAACATTACCTGAAATCAAA
AACTTTCTCTTGAAAATCCGTCTTCAACCCGGCACTGATTTTCAAATCGGGAAGACGCAA
ATTTTCCTCCGCGATCATGCTTCTCGGGTGCTCAAGGAGTCTCTCCACCGGGTGGTGCTC
AAACACGTAATCCTTCTACAATCTCGCATCCGAGGATACTTAGCTCGGCGGAGTTACTGC
CAGCAGAGGGCAGCAGCAGTGCAGATCCAGTCATACTGGAGGATGAGTTACAGGATTAAG
AAGAAGCAGCGATCCAATGCTGCTCTTCTTATACAGCGAAACTATAGAGGACATAGATCA
AGACTCTTGTATCGAACACTGAAACTAGAAAAAATGGACGAACAAAGGCAATCCTGGCCA
ATTTACAGCTCTGCATCCAAAAAAGAACAAACAATTGACGATAAGTCTGATGAGACTTCA
CCTTGCATGAGTCCACCAAATAGAACTCCACAGTTCAACGACACCAACAACAATCATGAT
ATCAGCGACAAGTTGAAAGGAACAATTGATTCCCCTGAACCCCAAGCGACTCCTCCTGTT
GACAAAACCCCATTCAGGGCCCGGACAAAAGCGGGGGAATTGTTTTTGAAGGCTGCGTAT
CCGCCAAATAAAATTGTGGTTGTGAAACCAGTGGTGTATGTGCCATCAAGCAAGCGGAAA
CAATATGATGATGAAACAGATTATGCGAAATCATATAGCTTGAAACCGTCAGTAAAAACT
CAAGATACTGGAAATTTCATGTACACTACCTCACCCTCTAAAATTGATACTGAGATGGAA
GCTGCTGCACCGGTCCAAGATAAACAGGCTGAAAAAAATACTTCCGACCTAAAACCTACT
GATCATCCTTTGAATGGGGAAATTGCGGAGACAAACTATCTGACACGTGCTCACAGTGAG
AGTGGCTCGCCTTCCAGCGGGTGGAGCAACAGAGGCAGCTCATCGATCTCAACAGGACCA
GTGATACCCAACAAACCTAATTCAGTACCCACTAAAGTGGAGAAATTAGTACCAGACAAA
AAATCTGAAACTTCGAAAAATGAAGACTTAGCAACAACCTCACAACCAACAGTTCCTTCC
TTTGCAAGAAGTGTGTCCATGGAAAGGTATTATCTAAATCGGGGACGGCAATTTTACTTA
AAATTAAACATAACTACCGTTACTCACAGTGTTGCCCTGTCGAAGCCACGACGACAACGA
AGTAACTCGGCGATTGAAACGTACATGGCATCAAAGGTACAACCCCCTTCCACAGACCCA
GTGGCTCGGAAATCTGCGTCTCTTAGTGCTGAAGCCTTTGCTAAGAAATGTATGCAGGAA
CAGTTTTTAATGTTTTCTTCTCTGCAGGAAAAGGCAAGCATTCCACAATATGCACCATTG
CATGACAGTGATCAGGAAACCCACCACCACCAACACACAGTAAATCATCTTGTTTTAAAG
TGTCATATTAAATACTATGCATGCAATATAACAGAAGATCTTACCGACGGGGGTAAGAGG
GGTAGTGCGTTTATTGAAGCGGTACGCAAGACATTCTGGGGGTCCAGTCGGGGTCAATCT
CGTACTCACCCAACACTTGCCGAGAGAAAATCCAACGACAGCGCTATATCTGCGAATGAT
GCGGTGAACATCCGCTCACTTGAGGAGGAGAAGTTTTCACCGAAACTCCTCGTTTCAAGC
GCCGATGTCCTTCTGCTCCTGGATGACTTCATCAAGAGCAAGACTTCGTCATTCAATGGC
GAGCATCTGGTGGACCAGGTCTTCAAAATCTCGTTGAACGAATTCTGTGCCAACCTGACG
GCGCTCTACTCCTTTGCGACTCTTAGTGGTGATACTAATGGCTTGCGATACAAGGATATC
GTCAGTAACTTTCGGCAGGTACTGGAAAAGACGGCGAACCACTATTCTCTGGATCAATAC
GCAGCCATGATGGGCGTGAATGGCTTCCGTGGGTACATGAATGAGTTCATGAATGATGTT
CTGCCCAAGTACACTGCGAGGGAGGCAAAATCGAAACGGAAAAAAGGCAAAGATGATTCA
GAGAAGTTGGGTCACCACTTTACTGGGGTCCAGTGGGGGATTACCCAGGTGTGTGAGTTC
TGTAATAACGTGATGTGGCTGATGGAGGCTGGGCTGATGTGCAAAATTTGCAAGTTCGCT
TGCCACAAGAAATGCTTCAAGCAGCTTACCACTAGATGTCCTGGCTCGACTGAAGTCGAC
AAATTAAAATCGAAACCAAAAAAGTTATTTGGAGAATCCCTAGCGAGTTTGGCATCCAAG
GAAAGTTCGGTGCCGACATTCATCGACAAGTGCATCAGCTACATGGAGATGAATGGGATA
TATCAGGAGGGGATTTACCGCAAATCTGCAGCTGTTGCGCAGAACAAGCTGTTGGAGGAA
TCACTCAACAAAGATATAGAGTGCCAAAAGGTCAATTTTGATGATTACAACATCCACTGC
GTCGCATCGTGTTTCAAGAAGTTTCTAAGGTCACTCCCCAGCCCACTGGTTCCTTATGAC
AAATATTTTGAGTTTCTACAAGCTGCCCGTATAACAAAAGAGCGGGAGAAAGTGAATGCG
CTATACCACGTCCTTGAGGGGATTCCCCGTCAAAACCATGCAACGCTTGAACGAATTGTC
TTCCATCTGGCACGGGTTGCACAACAGGAACCCACCAATCGGATGTCACCGAGCAACCTG
GCCATCGTGTTCACCCCGTGCTTCTTCGCCGCCCCACCCCATGTTTCCCCCATTGAAGCC
GCTGAACAAGTTGGGGACATGACCAAAGCAGTGGAATGTGTGATAAGCGAACAAGTGAAG
AAGATCAGGAGCACTCTGGAGAGCATCTCTGAGATACAAAGCGCTGAGTCTTCCACCAAT
GAGAGGTTGAAGCAGATCCGACAGTCC

InterProScan

ProSiteProfiles	RA_dom (IPR000159) - T[1-93] 23.479
SMART	RA_dom (IPR000159) - T[1-93] 1.8E-16
Pfam	RA_dom (IPR000159) - T[2-92] 7.7E-13
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[3-92] 1.89E-8
PANTHER	MYO9A (IPR028558) - T[35-701] 0.0 - T[764-1012] 0.0 - T[1439-1849] 0.0
SMART	Myosin_head_motor_dom (IPR001609) - T[126-917] 7.1E-239
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[129-658] 1.0E-215 - T[768-988] 1.0E-215
ProSiteProfiles	Myosin_head_motor_dom (IPR001609) - T[132-917] 188.506
Pfam	Myosin_head_motor_dom (IPR001609) - T[136-662] 3.0E-166 - T[778-904] 7.1E-25
Gene3D	Kinesin_motor_dom_sf (IPR036961) - T[136-318] 2.2E-180 - T[485-511] 2.2E-180 - T[808-847] 2.4E-19
PRINTS	Myosin_head_motor_dom (IPR001609) - T[162-181] 5.1E-46 - T[218-243] 5.1E-46 - T[263-290] 5.1E-46 - T[500-528] 5.1E-46 - T[553-581] 5.1E-46
SMART	IQ_motif_EF-hand-BS (IPR000048) - T[918-940] 2.8 - T[941-964] 22.0 - T[965-985] 6.1
ProSiteProfiles	IQ_motif_EF-hand-BS (IPR000048) - T[921-948] 8.352 - T[964-993] 8.755
Pfam	IQ_motif_EF-hand-BS (IPR000048) - T[922-939] 5.2E-4 - T[966-985] 0.012
ProSiteProfiles	PE/DAG-bd (IPR002219) - T[1564-1613] 12.171
ProSitePatterns	PE/DAG-bd (IPR002219) - T[1565-1613] .
SMART	PE/DAG-bd (IPR002219) - T[1565-1613] 2.4E-7
CDD	PE/DAG-bd (IPR002219) - T[1565-1613] 2.82062E-9
Gene3D	Rho_GTPase_activation_prot (IPR008936) - T[1623-1834] 9.6E-63
SUPERFAMILY	Rho_GTPase_activation_prot (IPR008936) - T[1625-1815] 6.08E-46
ProSiteProfiles	RhoGAP_dom (IPR000198) - T[1632-1822] 40.254
SMART	RhoGAP_dom (IPR000198) - T[1642-1819] 2.4E-51
Pfam	RhoGAP_dom (IPR000198) - T[1645-1793] 1.1E-40