Aniseed - Transcript Card

Clone 'AHC0AAA42YO05' >
Clone 'csef013k13' >
Transcript 'Cisavi.CG.ENS81.R48....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.3551038-3564697.19612.t

Possible name(s)

ASCL5; NHLH1; PTF1A

Gene model

Cisavi.CG.ENS81.R48.3551038-3564697

Location

R48 [3,551,037 / 3,564,586]

Sequences

Amino acid sequence

Length: 77

>Cisavi.CG.ENS81.R48.3551038-3564697.19612.p
TLQGVIPIRLTEQKKLHKKQTLQLAIRYINFLRGCLDGSRDWNERNRFWCQSQDEMMITA
IDQAAAPHITSFEATST

Nucleotide sequence

Length: 232

>Cisavi.CG.ENS81.R48.3551038-3564697.19612.t
ACACTACAGGGCGTTATTCCAATTCGTTTAACAGAGCAGAAAAAATTGCACAAGAAACAA
ACTCTGCAGCTCGCGATTCGTTACATCAATTTCCTCCGTGGCTGTCTGGATGGTTCGCGG
GATTGGAACGAGAGGAATCGATTTTGGTGTCAATCCCAGGACGAGATGATGATCACTGCC
ATCGATCAGGCTGCTGCTCCTCATATTACGTCATTCGAGGCTACGTCAACAT

InterProScan

PANTHER	Twist-related (IPR015789) - T[1-69] 2.5E-28
Gene3D	HLH_DNA-bd_sf (IPR036638) - T[1-45] 1.2E-8
SUPERFAMILY	HLH_DNA-bd_sf (IPR036638) - T[1-51] 1.96E-7
Pfam	bHLH_dom (IPR011598) - T[2-32] 2.3E-4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value