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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...' > 
  2. Transcript 'Cisavi.CG.ENS81.R48....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.3567266-3568243.19614.t

Possible name(s)

NHLH1; PTF1A; TWIST1

Gene model

Cisavi.CG.ENS81.R48.3567266-3568243

Location

R48 [3,567,265 / 3,568,243]

Sequences

Amino acid sequence

Length: 301

>Cisavi.CG.ENS81.R48.3567266-3568243.19614.p
NSRKRRCNNDVTSEAKRRRSNNGKERGRLSVFNQALETLQGVIPIRLTEQKKLHKKQTLL
LAIRYINFLRGCLDGSRDWNERNRFWCQSQDEMMITAIDQAAAPHTTSSDITSPLRPVMS
SSTMPQHMTYTDHTSPHITSNVVRANDTVPATEALSPYYITSFSKHNQLVDQNMTSQLNN
DVIHSTKFEFFEHQNHDAAYSQYDPTASFLSSYFLNNDVTHANNCQTAIVQSEVVDVSIP
SHYVSPSTYGVHSNYDATNHNNDVIQNQSTTERAFADLKAILSSPENNCYLPESPDSGYN
S

Nucleotide sequence

Length: 906

>Cisavi.CG.ENS81.R48.3567266-3568243.19614.t
AATTCTCGAAAACGCCGCTGCAATAATGATGTCACATCGGAAGCAAAGAGACGACGTTCG
AATAATGGAAAAGAGCGCGGACGCCTTAGCGTCTTCAATCAGGCACTAGAGACACTACAG
GGCGTTATTCCGATTCGTTTAACAGAGCAGAAAAAATTGCACAAGAAACAAACTCTGCTG
CTCGCGATCCGTTACATCAATTTCCTCCGTGGCTGTCTGGATGGTTCGCGGGATTGGAAC
GAGAGGAATCGATTTTGGTGTCAATCCCAGGACGAGATGATGATCACTGCCATCGATCAG
GCTGCTGCCCCTCATACGACGTCATCGGATATTACGTCACCATTACGACCTGTGATGTCA
TCCTCCACTATGCCTCAGCATATGACGTACACTGACCACACTTCACCACATATTACGTCA
AATGTTGTGAGAGCCAACGATACAGTTCCAGCAACAGAAGCATTGTCTCCTTATTATATT
ACGTCATTTTCGAAACATAACCAGCTTGTAGATCAGAACATGACGTCACAATTAAACAAT
GACGTAATTCATTCTACAAAATTCGAATTTTTTGAACATCAAAATCATGACGCAGCATAT
TCGCAGTACGACCCGACTGCGTCATTTCTTTCGTCATACTTTCTAAATAATGACGTCACA
CACGCTAATAATTGTCAAACGGCAATTGTGCAGTCAGAGGTCGTTGACGTCAGCATTCCG
TCACATTACGTATCACCATCGACGTATGGCGTCCATTCAAATTATGACGCCACCAACCAT
AATAATGACGTCATTCAAAATCAATCAACCACGGAAAGAGCATTTGCAGATTTGAAAGCG
ATTTTATCATCACCGGAAAACAATTGTTACTTGCCGGAAAGCCCGGATAGCGGGTACAAT
TCGTAA

InterProScan

PANTHER
Twist-related (IPR015789) - T[2-216] 2.0E-41
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[7-74] 1.5E-13
CDD
bHLH_dom (IPR011598) - T[14-70] 1.65767E-7
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[14-88] 4.84E-12
ProSiteProfiles
bHLH_dom (IPR011598) - T[16-69] 12.106
Pfam
bHLH_dom (IPR011598) - T[17-69] 1.5E-9
SMART
bHLH_dom (IPR011598) - T[22-75] 6.3E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value