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TRANSCRIPT CARD

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  1. Clone 'cilv004j03' > 
  2. Transcript 'Cisavi.CG.ENS81.R30....' > 
  3. Clone 'AHC0AAA129YI19' > 
  4. Transcript 'Cisavi.CG.ENS81.R48....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.3569982-3570961.19615.t

Possible name(s)

ASCL5; NHLH1; PTF1A

Gene model

Cisavi.CG.ENS81.R48.3569982-3570961

Location

R48 [3,569,981 / 3,570,961]

Sequences

Amino acid sequence

Length: 301

>Cisavi.CG.ENS81.R48.3569982-3570961.19615.p
NYRKRRSDGDVTSEAKRRRSNYGKEHNSLSVFNQALETLQGVIPIRLTEQKKLHKKQTLQ
LAIRYINFLRGCLDGSRDWNERNRFWCQSQDEMMITAIDQAAAPHITSSDITSPSRPVMS
SYNVPKHMTYTDHTSPHITSNVVRANDTIPQTEAFPPHHITSFPQHNLLKNQNMTSQLNN
DVIHPIEYKFIEHQNHDAAYSQYDPAASFLSSYFLNNDVTHPNNCQTAIEQLEVVDVNIP
SHYVSPSTYDVHSIYDATNHKNDVIQNQSTTERAFADLEEILSSPENSCYLPESPESGYN
S

Nucleotide sequence

Length: 908

>Cisavi.CG.ENS81.R48.3569982-3570961.19615.t
AGAATTATCGAAAACGTCGTTCCGATGGTGACGTCACATCGGAAGCAAAGCGGCGACGTT
CGAATTATGGAAAAGAACATAATAGTCTTAGCGTCTTCAATCAGGCACTTGAGACACTAC
AGGGCGTTATTCCAATTCGTTTAACAGAGCAGAAAAAACTGCACAAGAAACAAACTCTAC
AGCTCGCGATCCGTTACATCAATTTCCTCCGTGGCTGTCTGGATGGTTCGCGGGATTGGA
ACGAGAGGAATCGATTTTGGTGTCAATCCCAGGACGAGATGATGATCACTGCCATCGATC
AGGCTGCTGCTCCTCATATTACGTCATCGGATATTACCTCACCATCACGACCTGTGATGT
CATCCTACAATGTACCTAAGCATATGACGTACACTGACCACACGTCACCACATATTACGT
CAAATGTTGTGAGAGCCAACGATACAATTCCGCAAACAGAAGCATTCCCTCCTCATCATA
TTACGTCATTCCCGCAACATAACCTGCTTAAAAATCAGAACATGACGTCACAATTAAACA
ATGACGTAATTCATCCTATCGAATACAAATTCATTGAACATCAAAATCATGACGCAGCAT
ATTCGCAGTACGACCCGGCTGCGTCATTTCTTTCGTCATACTTTCTAAATAATGACGTCA
CACACCCAAATAATTGTCAAACAGCAATTGAACAATTAGAGGTTGTTGACGTCAACATTC
CGTCACATTACGTATCACCATCGACGTATGACGTCCATTCAATTTATGACGCCACCAACC
ATAAGAATGACGTCATTCAAAATCAATCAACCACGGAAAGAGCGTTTGCAGATTTAGAAG
AGATTTTATCATCACCGGAAAACAGTTGTTACTTGCCGGAAAGCCCGGAAAGCGGGTACA
ATTCGTAA

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[12-79] 3.0E-10
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[14-88] 1.7E-9
PANTHER
Twist-related (IPR015789) - T[14-219] 1.4E-36
CDD
bHLH_dom (IPR011598) - T[15-70] 1.7396E-5
ProSiteProfiles
bHLH_dom (IPR011598) - T[16-69] 10.22
Pfam
bHLH_dom (IPR011598) - T[31-69] 3.4E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value