- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.3573612-3574595.19616.t
Possible name(s)
NHLH1; PTF1A; TWIST1
Gene model
Location
R48 [3,573,611 / 3,574,595]
Amino acid sequence
Length: 303
>Cisavi.CG.ENS81.R48.3573612-3574595.19616.p
VDSRKRRCNNDVTSEAKRRRSNYGKERGRLSVFNQALETLQGVIPIRLTEQKKLHKKQTL
QLAIRYINFLRGCLDGSRDWNERNRFWCQSQDEMMITAIDQAAAPHITSSDITSPSRPVM
SSYNIPQHMTYTDHTSTPITSNVVTANDTVPQTEALPPHHITSFPQHNQLKDQNMTSQLN
NDLIHSTEPDFFEHQNHDAAYSQYDPTASFLSSYFLNNDVTHPNNCQTAIVRVQQVDDVN
FPSHYVLPSAYDVHSNYNATNHNNDVIQNQSTTERAFADLEEILSSPKNNCYLPESPESG
YNS
Nucleotide sequence
Length: 912
>Cisavi.CG.ENS81.R48.3573612-3574595.19616.t
GTGGATTCTCGAAAACGTCGCTGCAATAATGATGTCACATCGGAAGCAAAGAGGCGACGT
TCGAATTATGGAAAAGAGCGCGGACGCCTTAGCGTCTTCAATCAGGCACTAGAGACACTC
CAGGGCGTCATTCCGATTCGTTTAACAGAGCAGAAAAAACTGCACAAGAAACAAACTCTG
CAGCTCGCGATTCGTTACATCAATTTCCTCCGTGGCTGTCTGGATGGTTCGCGGGATTGG
AACGAGAGGAATCGATTTTGGTGTCAATCCCAGGACGAGATGATGATCACTGCCATCGAT
CAGGCTGCTGCTCCTCACATTACGTCATCAGATATTACGTCACCATCACGACCTGTGATG
TCATCCTATAATATACCTCAGCATATGACGTATACTGACCACACGTCAACACCTATTACG
TCAAATGTTGTGACAGCCAACGATACAGTTCCGCAAACAGAAGCATTGCCTCCTCATCAT
ATTACGTCATTTCCGCAACATAACCAGCTTAAAGATCAGAACATGACGTCACAATTAAAC
AATGACTTAATTCATTCTACCGAACCCGATTTTTTTGAACATCAAAATCATGACGCAGCA
TATTCGCAGTACGACCCGACTGCGTCATTTCTTTCGTCATACTTTCTAAATAATGACGTC
ACACACCCTAATAATTGTCAAACGGCAATTGTGCGAGTCCAGCAGGTTGATGACGTCAAC
TTTCCTTCACATTACGTATTACCATCGGCATATGACGTTCATTCAAATTATAACGCCACC
AACCATAACAATGACGTCATTCAAAATCAATCAACCACGGAAAGAGCATTTGCAGATTTG
GAAGAGATTTTATCATCACCGAAAAACAATTGTTACTTGCCGGAAAGCCCGGAAAGCGGG
TACAATTCGTAA
| PANTHER |
Twist-related (IPR015789) - T[3-194] 2.5E-40 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[8-75] 1.0E-12 |
| CDD |
bHLH_dom (IPR011598) - T[14-71] 6.06327E-7 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[15-89] 5.1E-12 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[17-70] 11.763 |
| Pfam |
bHLH_dom (IPR011598) - T[18-70] 7.9E-9 |
| SMART |
bHLH_dom (IPR011598) - T[23-76] 0.0058 |
| Protein Name | Identity | Bit Score | e-value |
|---|