Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.3576982-3578687.19617.t

Possible name(s)

MESP2; TWIST1; TWIST2

Gene model

Cisavi.CG.ENS81.R48.3576982-3578687

Location

R48 [3,576,981 / 3,578,687]

Sequences

Amino acid sequence

Length: 255

>Cisavi.CG.ENS81.R48.3576982-3578687.19617.p
MSDCPAKKSRRKKGEGKSKGTRSKRASTACAARPNAAIRERERLKVFNDSLEALQKVIPV
NLPEGRKLHKKQTLQLACRYIEFLKAVLDGERDWSERRRFWCGSDEDLNMIEAIDAAASE
NGITPKKMPKTGTEPHSDVAINGAHGKNDHHNTFIRCSTIPTVPHFPRTHITPLLPQLSE
VYPVANRPRPVGRVSDVTMTQQTSVDDVRETMEWKQKKMVAIKRESTEGFPVTGRDEYDM
WPDIIDIISKPEPRF

Nucleotide sequence

Length: 881

>Cisavi.CG.ENS81.R48.3576982-3578687.19617.t
ATGTCGGATTGCCCTGCTAAAAAATCACGGCGAAAAAAAGGGGAAGGAAAATCGAAAGGA
ACTCGCTCGAAAAGGGCTTCGACTGCTTGTGCTGCTCGTCCAAACGCAGCCATAAGGGAA
AGGGAGAGACTAAAAGTGTTTAACGACTCTTTGGAAGCTCTTCAGAAAGTTATTCCGGTC
AATTTACCAGAAGGAAGAAAGCTGCATAAAAAGCAAACCTTACAGCTAGCTTGCCGCTAC
ATTGAGTTCCTGAAGGCCGTATTGGACGGGGAGCGAGATTGGAGCGAAAGAAGAAGGTTC
TGGTGCGGTTCCGACGAAGACTTGAACATGATCGAAGCGATAGACGCTGCGGCTAGTGAA
AACGGGATCACCCCCAAGAAAATGCCTAAAACGGGTACTGAACCCCATTCTGACGTTGCA
ATAAATGGGGCACACGGTAAAAACGACCACCATAACACGTTTATCCGGTGTTCTACTATT
CCTACTGTACCCCATTTTCCCCGCACCCACATTACCCCCCTTTTACCCCAACTGAGCGAG
GTTTACCCCGTGGCTAACCGACCCAGGCCGGTTGGACGCGTGTCCGACGTCACAATGACG
CAACAAACAAGTGTTGATGACGTTCGAGAAACTATGGAATGGAAACAAAAGAAAATGGTG
GCCATAAAGAGGGAATCGACTGAGGGATTCCCAGTGACGGGAAGAGACGAGTACGATATG
TGGCCAGATATAATTGATATTATTTCAAAACCAGAACCTAGATTTTAAAGGATATATGGT
ATTTAATTTACCAAAAAATCGATATTAAAAAAACATAACAATTCAATGAAACGACAATCT
CGCTATTTTTCGAACTTGCTCGAGTCGAACGCTATTTAATA

InterProScan

PANTHER	Twist-related (IPR015789) - T[8-136] 5.7E-43
SUPERFAMILY	HLH_DNA-bd_sf (IPR036638) - T[23-97] 2.49E-12
Gene3D	HLH_DNA-bd_sf (IPR036638) - T[30-97] 2.6E-14
ProSiteProfiles	bHLH_dom (IPR011598) - T[31-84] 12.811
Pfam	bHLH_dom (IPR011598) - T[33-84] 5.9E-10
CDD	bHLH_dom (IPR011598) - T[35-88] 8.13235E-8
SMART	bHLH_dom (IPR011598) - T[37-90] 6.4E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value