- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.525249-538062.13934.t
Possible name(s)
IARS; IARS2; VARS
Gene model
Location
R48 [528,128 / 538,050]
Amino acid sequence
Length: 1,092
>Cisavi.CG.ENS81.R48.525249-538062.13934.p
VPEKFDFPKEEEKILELWNELDAFQTSLKQSKGKPRYAFYDGPPFATGLPHYGHILAGTI
KDIVTRYAHQSGFHVERRFGWDCHGLPVEYEIDKTLGIKGPEDVMKLGIAEYNRQCRSIV
MRYSSEWEMIVKRLGRWIDFKKDYKTLYPWFMESVWWVFKQLFDKGFVYRGFKVMPFSTG
CHTPLSNFEANQVRFFSNQILQISFLHNSFCLFLPEQKSLFIFFFWTKLQISRKPQYFLK
LIRYFSALVNHNYNRTNYKDVNDPAVIISFPLVDDPNVKLIAWTTTPWTLPSNLALCVNP
KMTYVKVKDKASGSIYILMEARLVALYKSDTEYEVIEKMQGTALFGLKYIPLFDYFDQVS
SLMKEDAFKVLTDGYVTDDSGTGVVHQAPFFGADDYRICLANKVFKKDGLPICPVDSSGK
FTDEVRDFAGMYVKDADKHICKLLKQRDRLVHQSTTKHNYPFCWRSDTPLIYKAVPSWFI
RVENITEKLLENNSQCYWVPEFVKEKRFANWLRDAHDWAVSRNRYWGTPIPIWVSEDLEE
VVCVGSIDELEELSGVRVTDIHRENVDDITIPSRLGKGVLRRIPEVFDCWFESGAMPYAQ
LHYPFEVTAITTTIINIYTVQNKKEFEDGFPADFIAEGIDQTRGWFYTLLVLSTSLFGKP
PFKNLIVNGLVLARYLMGTKMSKRKKNYPDPIEIITQYGADALRLYLINSPVVRAENLRF
QANGVKDVLKDVFLPWYNAYRFLIQNIIRLEKEEGIVFSYKDEDLGSSSNIMDQWILSSM
QSLVLFVKQEMQGYRLYTVVPKLVKFVDLLTNWYVRSNRRRLKGGLDDCLKALQTLFNVI
LTITKTMAPFTPFLTEHMYQNLKRIVPGLKSVDSVHYNMMSQPVIHTFGKKVPNKLISCF
FIIPHLFRESLISVKIEKAVSRMQSVIELARVIRDRKTMPTKYPLPEVVIIHKDPEYLDD
VVSLSRYVTEELNVRSVTTSSDKDKYGVSLRAEPDHVVLGKRLKGDFKSVMSGIRQLTND
QVEQYLEINIKKVTYISNKLLIIQQNDYHLRYEAHSDNDVLILLDVTPDQSMLDEGVARE
VINRIQKLRKKV
Nucleotide sequence
Length: 3,276
>Cisavi.CG.ENS81.R48.525249-538062.13934.t
GTTCCGGAAAAGTTTGATTTTCCGAAGGAAGAGGAGAAAATTCTCGAATTATGGAATGAA
TTGGATGCATTCCAAACTTCGTTAAAGCAATCCAAAGGAAAACCAAGATACGCTTTCTAT
GATGGACCTCCTTTTGCAACAGGACTTCCCCATTATGGACATATTTTAGCGGGGACAATC
AAAGACATTGTGACCCGTTATGCTCACCAAAGTGGTTTCCACGTTGAGCGCAGATTCGGT
TGGGATTGCCATGGACTCCCAGTGGAATATGAAATCGACAAAACGCTGGGTATCAAAGGA
CCTGAAGATGTGATGAAATTGGGAATAGCCGAGTACAACCGTCAGTGCCGTTCCATTGTA
ATGCGGTATTCTTCAGAATGGGAGATGATAGTTAAGCGACTTGGACGTTGGATTGACTTT
AAAAAAGACTACAAAACTTTGTATCCTTGGTTCATGGAATCTGTCTGGTGGGTCTTTAAA
CAATTATTCGATAAAGGTTTCGTTTATCGTGGTTTCAAGGTCATGCCATTCTCTACGGGT
TGCCATACCCCTCTATCCAACTTTGAGGCAAATCAGGTACGTTTTTTTTCAAACCAAATA
TTACAGATATCATTCTTACACAACAGTTTTTGTTTGTTTCTCCCTGAACAAAAATCATTA
TTTATCTTCTTTTTTTGGACTAAGCTACAAATCTCCCGAAAACCCCAATATTTTTTAAAA
CTAATTCGGTATTTTAGTGCACTAGTCAATCATAATTACAATCGGACCAATTATAAAGAT
GTCAACGATCCGGCCGTAATCATTAGTTTCCCCCTAGTGGACGATCCTAATGTGAAGTTA
ATCGCGTGGACAACCACCCCATGGACGCTGCCAAGTAACCTCGCACTCTGCGTTAATCCA
AAGATGACTTATGTCAAGGTGAAAGACAAGGCAAGTGGCAGCATCTACATACTGATGGAG
GCACGACTGGTGGCGCTTTACAAGTCTGATACAGAATATGAGGTCATTGAGAAGATGCAG
GGAACTGCGCTCTTCGGTCTCAAATATATTCCATTGTTTGATTATTTTGATCAAGTGAGT
AGTTTGATGAAAGAGGATGCATTTAAAGTTCTCACAGATGGGTATGTCACGGATGATAGT
GGAACAGGAGTGGTGCATCAGGCACCTTTCTTTGGTGCTGATGATTATCGCATTTGCCTG
GCAAACAAAGTGTTCAAAAAAGACGGACTCCCAATATGTCCTGTGGATTCTAGTGGAAAG
TTTACAGATGAAGTTAGAGACTTTGCCGGCATGTATGTTAAGGATGCAGATAAGCATATA
TGCAAGCTCTTGAAGCAGAGAGATCGCTTGGTGCACCAAAGCACCACGAAGCACAACTAC
CCATTCTGTTGGCGTTCCGATACCCCACTCATCTACAAGGCTGTACCCAGCTGGTTCATC
CGGGTGGAGAACATCACGGAAAAGCTGCTGGAGAACAATTCGCAGTGTTATTGGGTACCA
GAATTTGTAAAGGAGAAGCGGTTTGCAAATTGGTTAAGAGACGCCCACGACTGGGCTGTT
TCGAGGAACAGGTATTGGGGAACCCCCATCCCGATATGGGTGAGTGAGGATTTGGAGGAG
GTGGTGTGTGTGGGGTCAATTGACGAGCTCGAGGAATTAAGCGGGGTGAGGGTGACCGAC
ATACATCGGGAGAATGTTGATGACATCACAATTCCATCTCGGCTCGGCAAAGGAGTGCTT
CGACGTATCCCTGAAGTATTTGATTGCTGGTTCGAAAGTGGAGCCATGCCTTACGCACAA
CTCCATTACCCTTTCGAGGTGACTGCTATAACAACAACTATTATTAACATATACACTGTA
CAGAACAAGAAGGAATTCGAGGACGGGTTTCCAGCGGATTTCATTGCTGAGGGGATCGAT
CAAACCAGAGGGTGGTTCTACACATTACTTGTCCTATCCACAAGCTTGTTTGGCAAACCA
CCTTTCAAGAACCTTATTGTAAACGGTCTTGTTTTAGCAAGGTATTTGATGGGCACGAAA
ATGAGCAAGCGCAAGAAGAACTACCCCGATCCAATTGAGATCATAACCCAGTACGGGGCG
GACGCACTCCGATTGTATCTCATCAACTCTCCCGTCGTCCGTGCCGAGAACCTTCGCTTC
CAGGCCAATGGTGTCAAAGATGTACTGAAAGATGTCTTCTTGCCCTGGTACAACGCGTAC
AGGTTTCTAATCCAGAACATCATAAGACTTGAAAAAGAGGAAGGTATAGTGTTCAGTTAC
AAAGATGAAGATCTTGGCTCCTCTTCCAACATCATGGATCAATGGATTCTCTCTTCCATG
CAAAGTCTTGTGCTCTTTGTGAAGCAGGAAATGCAAGGGTACAGGCTATATACTGTTGTT
CCAAAGTTGGTCAAATTTGTTGATTTGTTGACAAACTGGTATGTGAGGTCCAATAGAAGA
AGGCTAAAGGGAGGGTTGGATGATTGCTTGAAAGCTCTGCAAACTTTGTTCAATGTGATT
CTGACGATCACAAAGACCATGGCCCCATTCACACCCTTTCTTACTGAGCACATGTACCAA
AATTTAAAGCGTATTGTGCCCGGCCTAAAATCTGTCGACAGTGTCCATTACAACATGATG
TCTCAACCTGTGATACACACTTTTGGTAAAAAAGTTCCCAATAAGTTAATTTCATGTTTT
TTTATAATTCCACACTTATTCAGGGAGTCACTGATCAGTGTGAAGATAGAGAAAGCTGTG
TCTCGGATGCAAAGTGTCATCGAACTTGCAAGGGTCATCAGAGATAGGAAGACGATGCCC
ACCAAGTACCCGCTTCCGGAAGTCGTGATCATCCACAAGGATCCGGAGTATTTGGATGAC
GTGGTGAGTTTAAGCCGCTACGTCACCGAGGAGCTGAATGTACGAAGCGTGACTACGTCA
TCGGACAAGGACAAGTATGGAGTCAGTCTACGCGCCGAGCCTGATCATGTGGTGCTGGGA
AAGAGATTGAAAGGCGACTTCAAGTCTGTGATGTCAGGAATCCGACAGCTCACGAATGAC
CAGGTTGAACAATACTTGGAAATAAATATAAAAAAAGTTACTTACATTTCCAACAAGTTA
CTAATAATTCAACAAAATGACTATCATCTCAGGTATGAGGCTCACTCGGACAATGACGTG
TTGATCTTATTGGACGTGACACCCGACCAATCAATGCTGGATGAGGGGGTGGCGAGGGAG
GTCATCAATAGAATTCAAAAACTCAGGAAGAAGGTT
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[2-202] 5.4E-63 - T[419-718] 3.9E-94 |
| Pfam |
aa-tRNA-synth_Ia (IPR002300) - T[14-192] 2.3E-70 - T[256-718] 7.0E-147 |
| PRINTS |
Ile-tRNA-ligase (IPR002301) - T[37-48] 2.9E-6 - T[582-595] 2.9E-6 |
| ProSitePatterns |
aa-tRNA-synth_I_CS (IPR001412) - T[44-55] . |
| TIGRFAM |
Ile-tRNA-ligase (IPR002301) - T[244-959] 4.2E-194 |
| SUPERFAMILY |
Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[259-460] 5.55E-47 |
| Gene3D |
Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[264-413] 1.9E-18 |
| CDD |
Anticodon_Ile_ABEc (IPR033709) - T[720-931] 3.29211E-75 |
| SUPERFAMILY |
tRNAsynth_Ia_anticodon-bd (IPR009080) - T[735-1009] 3.74E-38 |
| Pfam |
M/V/L/I-tRNA-synth_anticd-bd (IPR013155) - T[773-948] 5.1E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYIM_HUMAN | 25.626 % | 240 | 1.6E-65 |
| SYIC_HUMAN | 62.646 % | 1098 | 0 |
| SYVC_HUMAN | 22.61 % | 106 | 4.04E-23 |