- Transcript 'Boleac.CG.SB_v3.S266...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S266.g06309.01.t
Possible name(s)
ALX4; PHOX2A; PHOX2B
Gene model
Location
S266 [169,928 / 170,692]
Amino acid sequence
Length: 145
>Boleac.CG.SB_v3.S266.g06309.01.p
ELERVFSETHYPDIYTREELALKIDLTEARVQVWFQNRRAKWRKMERAKQQQLQPHISQG
SPASSGSSEVLSNETNPYEVTGRSGAINSSETEPKGINEAAVSPENAQSVKEDQQNEMNM
TEIEMDLPCKDQTLLKVGISPNSSG
Nucleotide sequence
Length: 438
>Boleac.CG.SB_v3.S266.g06309.01.t
GAGCTGGAAAGAGTCTTCTCTGAGACTCACTACCCCGACATTTACACTCGGGAAGAGCTC
GCGTTGAAAATCGATCTCACAGAAGCCAGAGTTCAGGTATGGTTTCAAAACCGCAGAGCA
AAATGGAGGAAAATGGAACGCGCCAAACAGCAACAGTTGCAGCCTCACATCTCTCAAGGA
AGTCCCGCGTCGTCAGGCTCCAGTGAAGTCCTGAGCAACGAAACAAATCCTTATGAGGTA
ACAGGAAGAAGCGGTGCTATCAATTCAAGCGAGACCGAACCGAAAGGCATAAATGAAGCG
GCTGTGTCTCCAGAAAATGCTCAGAGTGTCAAGGAAGACCAACAAAATGAAATGAACATG
ACTGAAATTGAGATGGATCTACCTTGCAAAGATCAGACGCTATTGAAAGTCGGAATCTCC
CCGAATTCTTCAGGTTGA
| CDD |
Homeobox_dom (IPR001356) - T[1-46] 9.10732E-19 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[1-50] 3.21E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[1-44] 1.7E-18 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[1-45] 16.957 |
| SMART |
Homeobox_dom (IPR001356) - T[1-49] 3.8E-13 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[20-43] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALX4_HUMAN | 71.186 % | 97.1 | 1.19E-24 |
| PHX2B_HUMAN | 93.617 % | 100 | 3.37E-26 |
| PHX2A_HUMAN | 93.617 % | 99 | 5.53E-26 |