Aniseed - Transcript Card

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Transcript 'Cisavi.CG.ENS81.R488...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R488.78527-82904.04278.t

Possible name(s)

RPL7; RPL7L1

Gene model

Cisavi.CG.ENS81.R488.78527-82904

Location

R488 [78,965 / 81,033]

Sequences

Amino acid sequence

Length: 255

>Cisavi.CG.ENS81.R488.78527-82904.04278.p
IPNYPHKITLPPPHSKKLPRVPESLLKKRKEYQAQKAKQAQAAILSKKKNREKRKLIFKR
AEQYVKEYRMKERDGIRLARQARTHNNYYVPDEPTLAFVIRIRGINQVSPKVRKVLQLLR
LRQIHNGVFIKLNKATLQMLRIAEPYIAWGYPNLKTVRELVYKRGHGRVNKSRIPITDNN
IIENTLGKHGIICVEDLIHEIFTVGPHFRAAAAFLWPFKLSSPRGGFLKVTNHYVEGGDC
GNREDKINNLVRQMN

Nucleotide sequence

Length: 783

>Cisavi.CG.ENS81.R488.78527-82904.04278.t
ATTCCCAATTACCCCCACAAAATAACCCTCCCCCCCCCCCACAGTAAGAAACTCCCGAGA
GTGCCGGAGTCCCTTCTAAAGAAGCGGAAGGAATACCAGGCACAGAAAGCTAAACAAGCG
CAAGCCGCCATCCTTAGTAAGAAGAAAAACCGCGAGAAGCGCAAGTTGATCTTCAAGCGT
GCCGAGCAGTATGTGAAGGAATATCGGATGAAGGAACGTGACGGAATCCGATTGGCGCGA
CAAGCTCGGACGCACAACAACTACTACGTCCCCGATGAACCCACTCTTGCGTTCGTTATC
CGTATCAGAGGTATCAACCAAGTGAGCCCGAAAGTCCGCAAAGTTCTCCAACTTCTGCGA
CTCCGCCAAATCCACAATGGAGTTTTCATCAAGTTGAACAAAGCAACGCTGCAGATGCTG
CGAATCGCTGAGCCGTATATCGCGTGGGGCTACCCTAACTTGAAGACTGTGCGTGAACTC
GTGTACAAACGGGGTCACGGAAGGGTCAACAAGTCACGCATCCCGATCACTGACAACAAC
ATCATCGAAAACACACTCGGCAAACACGGTATCATATGCGTAGAGGATCTCATCCACGAG
ATCTTCACCGTCGGCCCTCACTTCCGCGCTGCTGCAGCCTTCTTGTGGCCGTTCAAACTC
TCGTCCCCACGCGGGGGATTCCTCAAAGTGACGAATCACTATGTGGAAGGAGGTGATTGT
GGGAATCGGGAGGATAAGATAAACAACCTCGTGCGGCAGATGAATTAAACATCTTCCTTG
AAA

InterProScan

Pfam	Ribosomal_L30_N (IPR012988) - T[21-92] 2.5E-29
TIGRFAM	Ribosomal_L7_euk (IPR005998) - T[22-255] 2.3E-103
SUPERFAMILY	L30_ferredoxin-like_sf (IPR036919) - T[96-255] 1.26E-59
CDD	Ribosomal_L7_euk_arc (IPR035808) - T[96-255] 1.74372E-90
Pfam	Ribosomal_L30_ferredoxin-like (IPR016082) - T[97-147] 8.9E-23
Gene3D	L30_ferredoxin-like_sf (IPR036919) - T[99-152] 3.1E-28 - T[216-243] 3.1E-28
ProSitePatterns	Ribosomal_L30_CS (IPR018038) - T[115-147] .
Gene3D	Ribosomal_L30_central_dom_arc (IPR023106) - T[153-215] 3.1E-28

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL7_HUMAN	64.167 %	322	5.59E-112
RL7L_HUMAN	47.967 %	222	8.69E-73