- Clone 'cibd083d13' >
- Clone 'cien53493' >
- Transcript 'Cisavi.CG.ENS81.R49....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R49.1346410-1353176.14493.t
Possible name(s)
C6; C8A; C9
Gene model
Location
R49 [1,346,409 / 1,353,176]
Amino acid sequence
Length: 555
>Cisavi.CG.ENS81.R49.1346410-1353176.14493.p
MRCRNLSLAKAPKKSTPSSYQLRATAWTGWVSCTVSCGSGTQTRSRRITRHPANGGSGCG
ALSQSRACNQHRCPIHCSWGEWGNWSSCTSCYPGGRSRTRSVTTAAMFGGDQCSGSSVNT
DFTCTPTGNTEECPEMVECPTSQYSCNDGLTCIRKHLRCNGDDDCTDYSDEGDCPAAVRK
ACGNDDVTDIPYIDIAGASYDITLGEEIGTVLDNRQYGGRCSRVRSGEHNQVFRRPANIQ
SFRFQTHASTTFTSVSYESSKSFYESERGNMERKLEASSSFSFGDIFSLSGGATKTRNSK
VLRILDRGTSSDVKYFRVFSDIVLSRFRTMRRSLMLSPLLRRRIQDLPSTYDPAKYSEII
ADYGTHFYSSGVLGGRYEYIYRFSKADLRQSGLTDEEQKNCLSTEASFKLLKLFGGKGGT
TRCSTNLLSRKHNGSFTLAAKEAISNVIGGQSHRAGALSFFSNNVPNRNAYQLWLDSIRL
NPAAIDFTLSPISSIIPDNTKRANLERALNEYLSKYDVTKCTGGCENSGRPVVVMDGSIC
ECLCTSGHSGPACEN
Nucleotide sequence
Length: 2,142
>Cisavi.CG.ENS81.R49.1346410-1353176.14493.t
GATAGCAAAATGAGATTTCTTACCTCGTTTCTGGTTATCGCTTTATGCGTTGTCGCAACC
TCAGCCTGGCGAAGGCGCCGAAGAAGAGCACCCCCTCCTCGTATCAACTGCGCGCGACGG
CTTGGACTGGTTGGGTCTCGTGCACTGTAAGCTGTGGATCGGGGACACAGACCAGATCAC
GACGAATAACTAGGCATCCTGCGAACGGTGGTTCAGGCTGCGGGGCGCTGAGTCAGTCGA
GAGCTTGCAACCAACATAGATGTCCTATACACTGCAGCTGGGGAGAATGGGGCAACTGGT
CGTCGTGCACATCATGCTACCCAGGAGGACGGAGTCGGACGCGATCTGTCACAACAGCTG
CGATGTTCGGTGGCGATCAGTGTTCAGGCTCCTCTGTCAACACTGATTTCACATGCACAC
CAACTGGCAACACTGAAGAATGTCCGGAGATGGTTGAATGCCCGACAAGCCAATATTCCT
GCAACGACGGCTTGACGTGCATCCGTAAACACCTTCGTTGTAATGGAGATGATGATTGTA
CCGATTATTCTGACGAGGGTGACTGCCCGGCCGCTGTGCGCAAGGCGTGCGGCAACGATG
ACGTGACCGACATCCCGTATATTGATATCGCCGGTGCAAGTTATGACATCACGCTGGGAG
AGGAGATTGGTACGGTGCTGGACAACCGGCAATATGGCGGTCGATGCAGCCGAGTAAGAA
GCGGAGAACACAACCAAGTATTCAGGAGACCCGCTAACATTCAATCATTTAGGTTTCAGA
CCCATGCTAGCACCACCTTTACATCCGTTTCGTACGAAAGCTCCAAAAGCTTTTACGAGT
CGGAAAGAGGGAACATGGAAAGAAAGCTGGAAGCTTCTTCTTCATTTTCGTTCGGCGACA
TATTCAGTTTGAGCGGAGGAGCGACCAAAACACGGAACAGCAAAGTTCTTCGCATCCTCG
ACCGAGGCACGTCAAGTGACGTGAAGTATTTCCGGGTGTTCAGTGACATCGTGCTGTCAA
GGTTCCGAACCATGCGAAGATCGCTGATGTTATCGCCCTTACTCCGACGGCGGATACAGG
ATCTCCCCAGTACCTACGACCCCGCGAAGTATTCGGAAATCATCGCCGATTACGGGACTC
ATTTCTACTCCTCCGGAGTGCTGGGAGGAAGATACGAATACATCTACCGGTTCTCGAAAG
CTGACTTGCGTCAATCAGGCTTGACAGACGAAGAGCAGAAGAATTGTTTAAGTACCGAAG
CGTCTTTCAAGTTGCTGAAGCTGTTTGGCGGAAAGGGTGGAACAACCCGATGTTCAACCA
ACTTGTTATCCAGAAAACACAACGGGAGTTTCACGTTGGCGGCAAAGGAAGCAATATCGA
ACGTCATCGGCGGCCAGTCACACCGGGCGGGTGCATTAAGCTTCTTCTCCAATAATGTAC
CAAACAGGAACGCATACCAACTGTGGCTGGACTCAATCCGACTAAATCCTGCAGCGATTG
ACTTTACGCTAAGTCCAATTTCGTCGATAATACCGGACAACACAAAGCGAGCAAACTTGG
AAAGAGCATTAAACGAGTACCTGAGCAAATATGACGTCACCAAATGCACGGGTGGTTGTG
AGAATAGCGGACGACCGGTGGTGGTGATGGATGGGTCGATCTGTGAGTGTCTGTGCACAT
CTGGCCATTCCGGGCCAGCCTGTGAGAACTGATTGAGAATAACTCCCGTTCCAGAAGCTT
AGTCGAGCGTATTTTTTCTCCTTCGTTACATTATTACACGTCGATTCATACACATGTTTT
ATCAGGATAATAATATACGTGTCCGTTAAACCTTACTTTAAAAAATGGATATGATACAAG
ACACATAAAGACATACATTTCTCAAATCGTTCGTTTTTAACCTTGCTTTTTGTCTTATGA
TTCCATTAATGGGTATGCATGAACATCCCTGTTTTAATCATTGTAGGAATGTGTGTGTGT
TTACGAAACTTTGTTAACCTTTCGGGGTTATGTCATCCAACTGTCATTCCGCTGGAGCCA
AAGTGCATTTGCTGTTCATTTTCTTTATATTGTGCTGACGAATTCATTATTTACGTGTTT
TGTCAACGAATTGTAAATAAACATCTGCTCGGCAAGGATATA
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[21-74] 11.222 - T[76-140] 9.281 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[23-74] 1.1E-11 - T[75-134] 2.6E-6 |
| SMART |
TSP1_rpt (IPR000884) - T[24-74] 8.1E-10 - T[79-140] 0.003 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[25-70] 7.19E-8 - T[75-119] 1.83E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[26-73] 1.1E-7 - T[80-139] 3.4E-4 |
| PRINTS |
MAC_perforin (IPR001862) - T[97-113] 5.9E-15 - T[345-367] 5.9E-15 - T[473-492] 5.9E-15 - T[522-542] 5.9E-15 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[137-175] 4.32E-9 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[138-176] 4.3E-10 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[138-175] 12.075 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[138-174] 1.1E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[139-174] 1.0238E-9 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[152-174] . |
| ProSiteProfiles |
MACPF (IPR020864) - T[178-526] 27.898 |
| Pfam |
MACPF (IPR020864) - T[310-512] 4.1E-38 |
| SMART |
MACPF (IPR020864) - T[314-514] 4.3E-41 |
| ProSitePatterns |
MACPF_CS (IPR020863) - T[356-367] . |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[517-554] 8.856 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[542-553] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CO6_HUMAN | 34.879 % | 295 | 1.67E-89 |
| CO8A_HUMAN | 27.466 % | 200 | 3.9E-57 |
| CO9_HUMAN | 29.273 % | 199 | 5.09E-57 |