- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Clone 'cicl065n08' >
- Transcript 'Cisavi.CG.ENS81.R49....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R49.207691-211593.11066.t
Possible name(s)
ALX1; ARX; OTP
Gene model
Location
R49 [207,690 / 211,593]
Amino acid sequence
Length: 490
>Cisavi.CG.ENS81.R49.207691-211593.11066.p
MDPVTLQPSKTVSQGNKVYLADTEQMFGQSDQTWQENCDSTASCQFENIKQTHYPYSDRN
VERCQFDSYHFEGEANFPWGYEVSGTEDGNDAESPTNGASNESMTFTSSYDRYMEISYDC
DTSTSEYEKEQVEQIPISKNFDHFDPKLLALQKFVENRGSKKTWNNNTQSCNPAQTAQNT
QTKNLATVKSQTKEKPTSETQKNTEPTIKARPVKENIKESVKSNDQPNNHTSKPLHTKQQ
NQKAKTSTKTIELKKQEVLKKAEVAKSKRHRTRFAPSQLSELERSFSSTHYPDIFMREEI
AHRIGLTESRVQVWFQNRRAKWKKRKAATSCSNSWPFQAAPAGNGFPFSGQVYQNSPGST
MAAAFANESFYALQNSGESNWMANAMTGFGKDVSYGSNCMTPSAFPGQQVMDMTSRVNDD
VTNHTHDDVYAYGEYHPSTAAYPPKSFYPPDDVTREFPHKRGTHSPTKNHATQRPFPLQN
NPMPLYGTHY
Nucleotide sequence
Length: 1,473
>Cisavi.CG.ENS81.R49.207691-211593.11066.t
ATGGACCCAGTGACACTTCAGCCTTCCAAAACTGTTTCACAAGGAAACAAGGTCTATCTG
GCGGACACGGAGCAAATGTTCGGGCAAAGTGACCAAACCTGGCAGGAAAATTGCGATTCA
ACGGCATCCTGCCAATTTGAGAACATCAAACAGACCCATTATCCGTATTCGGACCGAAAT
GTTGAGCGTTGTCAGTTTGACAGTTATCATTTTGAGGGTGAAGCGAATTTTCCGTGGGGC
TACGAGGTATCCGGTACGGAAGACGGAAACGATGCGGAATCCCCTACAAACGGAGCTAGC
AACGAGTCTATGACCTTCACATCGTCCTATGATCGATATATGGAGATCAGTTATGACTGC
GACACCAGTACAAGTGAGTATGAAAAAGAGCAAGTGGAGCAGATTCCGATTTCGAAAAAT
TTCGATCATTTTGATCCCAAGCTTCTGGCGCTGCAAAAGTTCGTGGAAAATCGAGGAAGC
AAAAAGACATGGAACAATAATACCCAATCGTGCAACCCAGCGCAAACTGCTCAAAACACA
CAAACTAAAAATCTTGCTACGGTTAAAAGCCAAACCAAAGAAAAACCAACGTCAGAAACG
CAGAAAAATACCGAACCAACCATAAAAGCGAGACCTGTCAAGGAAAATATAAAAGAATCG
GTGAAATCCAACGATCAACCAAACAACCACACCTCTAAACCACTACACACCAAACAACAA
AACCAGAAAGCGAAAACTTCGACTAAAACGATCGAGCTAAAGAAACAAGAAGTCCTGAAG
AAAGCGGAAGTTGCGAAATCGAAACGTCACAGAACGCGATTCGCCCCTTCCCAGCTGAGC
GAACTTGAACGGAGCTTCTCATCCACCCACTACCCCGACATCTTCATGAGGGAGGAGATA
GCACACAGGATCGGGTTGACCGAATCAAGAGTACAGGTTTGGTTTCAAAACCGCCGTGCA
AAATGGAAGAAGCGCAAAGCGGCCACATCTTGCAGTAACTCTTGGCCGTTTCAAGCAGCG
CCGGCGGGAAATGGCTTCCCGTTTTCCGGTCAAGTATACCAGAACAGCCCGGGGTCAACC
ATGGCAGCGGCGTTTGCGAATGAAAGCTTCTACGCCCTTCAGAACTCGGGTGAAAGTAAC
TGGATGGCAAACGCTATGACAGGTTTTGGCAAAGATGTGAGTTACGGGAGCAACTGTATG
ACGCCATCCGCGTTTCCCGGGCAACAAGTAATGGACATGACGTCACGAGTCAACGATGAC
GTAACGAACCATACGCACGATGACGTATATGCGTACGGAGAGTACCATCCATCCACCGCC
GCCTATCCGCCCAAATCGTTCTACCCACCCGATGACGTAACGCGGGAATTCCCCCATAAA
AGAGGCACCCACTCACCGACCAAGAACCATGCAACCCAGCGCCCCTTCCCATTGCAAAAC
AATCCAATGCCGCTATACGGAACCCATTACTGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[264-328] 5.99E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[265-325] 20.601 |
| SMART |
Homeobox_dom (IPR001356) - T[267-329] 7.7E-28 |
| CDD |
Homeobox_dom (IPR001356) - T[268-326] 7.57984E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[268-324] 6.8E-24 |
| PRINTS |
HTH_motif (IPR000047) - T[296-305] 3.0E-5 - T[305-321] 3.0E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[300-323] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARX_HUMAN | 66.667 % | 97.4 | 1.74E-21 |
| ALX1_HUMAN | 62.903 % | 92.8 | 8.57E-21 |
| OTP_HUMAN | 86.275 % | 98.2 | 1.13E-22 |