Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R49.2305851-2311383.16247.t

Possible name(s)

RDH11; RDH13; RDH14

Gene model

Cisavi.CG.ENS81.R49.2305851-2311383

Location

R49 [2,305,850 / 2,311,383]

Sequences

Amino acid sequence

Length: 299

>Cisavi.CG.ENS81.R49.2305851-2311383.16247.p
MEGKTIIITGANAGIGMETALDLVRRGGRVIMACRNLGKAEVARDKILQESGKCEEAVVI
KQLDLSSLQSIRKFASDINATENRIDVLVNNAGLMLPPETTTMDGFEAQVGVNHLGHFLL
VNLLLDLLKRSAPSRIVVVASEAHRIGNPRINWEDINCGIGLDIYCASKLMNILFARELS
DRLKGLFNLLSLHFNSLHPGVIRSGLWYHMHDQNISVWRSLLHSMMRPMMNMFWKSPPYG
AQTTIFCCVAPELHNVSGKYFSDCAVAFESAAAKSKQDAVRLWNISEKLVSLNGTESFA

Nucleotide sequence

Length: 1,195

>Cisavi.CG.ENS81.R49.2305851-2311383.16247.t
ATGGAAGGTAAAACTATTATTATCACCGGAGCGAACGCTGGAATTGGAATGGAAACTGCG
TTAGATCTTGTACGACGTGGAGGAAGAGTTATTATGGCTTGCAGGAACCTGGGAAAGGCA
GAAGTTGCAAGAGATAAAATATTGCAAGAAAGCGGGAAATGTGAAGAGGCGGTTGTTATA
AAGCAACTTGATCTAAGTTCTTTGCAATCCATCCGTAAATTTGCCAGTGATATTAACGCC
ACTGAAAATCGAATCGATGTTCTAGTAAATAATGCCGGGTTAATGCTTCCACCTGAAACG
ACTACCATGGACGGGTTTGAAGCGCAGGTTGGTGTTAATCACCTCGGGCACTTTCTGCTC
GTCAATCTACTACTTGATTTATTAAAGAGAAGCGCTCCCAGTCGGATTGTTGTAGTCGCG
TCAGAGGCTCATAGAATCGGTAATCCGAGGATTAATTGGGAAGACATCAACTGTGGTATA
GGATTGGATATTTATTGCGCAAGCAAACTCATGAATATCCTCTTCGCTCGGGAACTCAGC
GACCGTTTAAAAGGCTTGTTCAACCTTCTTTCATTGCATTTCAATTCGTTACACCCTGGT
GTTATACGATCAGGGTTGTGGTACCACATGCATGACCAGAACATCTCGGTTTGGAGGTCG
CTTCTACATTCTATGATGCGACCGATGATGAACATGTTTTGGAAGTCACCCCCATACGGA
GCCCAGACAACTATATTCTGCTGCGTGGCTCCGGAGTTACACAATGTGTCCGGGAAATAC
TTCAGCGATTGTGCAGTAGCATTTGAGAGTGCTGCCGCCAAGAGCAAACAAGATGCTGTA
AGATTGTGGAATATCAGCGAAAAGTTGGTTTCATTGAACGGCACCGAGAGTTTTGCTGTC
AGGAGCAAACTTGATACGATTGCTTTACCACGACTGTGATTTATATTACTATTATTCTAC
CATAAGTGGCATTGTGAGTTCGATGATGACTTATACCGTCACACACATGTATTAAATAAC
CTGCATTTTGTCATTTGTAGATAGTCGTATACAACATGACATGATTGCTCTAATAATGTA
ATGTCCCATACAATAATGCAGCATTCTTCTTACATTGTGAACATTACACATGATTGTCAT
GAAGATTCTCTGTATTACGTAATCACCCGGACCAAGCTTCCATGCAATAAATGAA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[1-267] 7.08E-53
Pfam	SDR_fam (IPR002347) - T[4-206] 2.2E-26
PRINTS	SDR_fam (IPR002347) - T[5-22] 1.4E-13 - T[83-94] 1.4E-13 - T[128-144] 1.4E-13 - T[165-184] 1.4E-13 - T[190-207] 1.4E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	44.186 %	215	1.3E-68
RDH13_HUMAN	45.485 %	214	6.77E-68
RDH14_HUMAN	43.871 %	224	1.35E-71