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  1. Transcript 'Haaura.CG.MTP2014.S8...'
  2. Transcript 'Cisavi.CG.ENS81.R49....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R49.2860320-2864263.17498.t

Possible name(s)

LDB3; PDLIM1; PDLIM3

Location

R49 [2,860,319 / 2,863,655]

Sequences

Amino acid sequence

Length: 189

>Cisavi.CG.ENS81.R49.2860320-2864263.17498.p
MATPRIQTSVTLFGSPPWGFRISGGKEYNQPLVFTRITPGSLAARSGLTSGDVLIAVNGQ
HVADMTQDICETKIKQAVGSIQFVIQKNAAVMSQNASGEVVLESDRSVYVPRPTITSKNR
SMPMTPQSASGSVPEFDPSVLKRSATSKQAVVMKGPGSSKVVHAQYNTPMGMYSNDNIMD
TVQAQAQSK

Nucleotide sequence

Length: 667

>Cisavi.CG.ENS81.R49.2860320-2864263.17498.t
GCTAATCAATTCAGCTGTTTAACTGCAAGTCTGTGTCTCGAAGTGACATTTCGTTGCGAA
ACAACAGGCCTTGATTTCGTCGATGACATTCTAAATAACAATGGCGACCCCAAGAATACA
AACGTCAGTAACACTATTTGGTTCCCCACCATGGGGATTCCGGATTTCTGGCGGTAAAGA
ATACAACCAACCTCTTGTATTCACACGGATTACCCCAGGAAGCTTAGCGGCGCGATCTGG
TCTAACTTCCGGCGATGTCTTAATAGCCGTGAACGGGCAACACGTAGCGGATATGACGCA
AGATATATGCGAAACGAAGATTAAACAAGCCGTCGGCTCCATTCAATTCGTTATACAAAA
GAATGCTGCTGTTATGTCACAGAATGCTAGCGGTGAGGTCGTGTTGGAATCTGATCGAAG
TGTGTATGTCCCGCGGCCAACCATTACGTCAAAGAATCGGTCGATGCCAATGACCCCACA
AAGCGCAAGTGGTTCGGTGCCGGAGTTCGATCCATCTGTGTTGAAACGATCCGCAACGTC
CAAGCAAGCAGTCGTGATGAAAGGACCTGGTTCATCGAAAGTTGTGCACGCACAGTACAA
CACACCAATGGGAATGTATTCCAACGATAATATCATGGACACAGTTCAAGCACAAGCACA
ATCTAAG

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[8-91] 8.02E-18
ProSiteProfiles
PDZ (IPR001478) - T[14-89] 14.014
SMART
PDZ (IPR001478) - T[16-89] 8.5E-15
Pfam
PDZ (IPR001478) - T[17-86] 8.6E-14
Pfam
DUF4749 (IPR031847) - T[160-187] 3.7E-10
SMART
Zasp-like_motif (IPR006643) - T[160-185] 2.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LDB3_HUMAN 30.841 % 89 7.05E-21
PDLI3_HUMAN 35.749 % 102 3.3E-26
PDLI1_HUMAN 32.558 % 85.9 2.91E-20





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