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  1. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  2. EST 'JG341091' > 
  3. Transcript 'Cisavi.CG.ENS81.R49....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R49.2860320-2864263.17499.t

Possible name(s)

LDB3; PDLIM1; PDLIM3

Gene model

Cisavi.CG.ENS81.R49.2860320-2864263

Location

R49 [2,860,672 / 2,862,601]

Sequences

Amino acid sequence

Length: 177

>Cisavi.CG.ENS81.R49.2860320-2864263.17499.p
MATPRIQTSVTLFGSPPWGFRISGGKEYNQPLVFTRITPGSLAARSGLTSGDVLIAVNGQ
HVADMTQDICETKIKQAVGSIQFVIQKNAAVMSQNASGEVVLESDRSVYTRDASEKERIA
RHNRSAKPFASQTPATKSANGFRSVSFQPKPATPTTGGDIDTNCNLDSAVCNETMDL

Nucleotide sequence

Length: 702

>Cisavi.CG.ENS81.R49.2860320-2864263.17499.t
TCCTGTTTAGTTTCAACTAAGAGTGATAGGATTCCGGGTAATAACAAGAGCGACTGGAAG
TGCGAAAGGTAGACAAGCCAGCTGATAATACATTCTAAATAACAATGGCGACCCCAAGAA
TACAAACGTCAGTAACACTATTTGGTTCCCCACCATGGGGATTCCGGATTTCTGGCGGTA
AAGAATACAACCAACCTCTTGTATTCACACGGATTACCCCAGGAAGCTTAGCGGCGCGAT
CTGGTCTAACTTCCGGCGATGTCTTAATAGCCGTGAACGGGCAACACGTAGCGGATATGA
CGCAAGATATATGCGAAACGAAGATTAAACAAGCCGTCGGCTCCATTCAATTCGTTATAC
AAAAGAATGCTGCTGTTATGTCACAGAATGCTAGCGGTGAGGTCGTGTTGGAATCTGATC
GAAGTGTGTATACACGTGATGCGAGTGAGAAAGAGAGGATTGCACGTCACAATAGATCAG
CCAAACCATTCGCTTCACAAACCCCTGCAACGAAAAGCGCGAACGGCTTTCGCTCGGTCT
CCTTTCAACCCAAGCCCGCCACCCCGACCACTGGGGGCGATATTGACACCAACTGCAACC
TGGACTCGGCCGTTTGCAACGAGACGATGGACTTGTAGTTATCACATTACACATTATGAT
ATCAGTGCATGGAGTTATTCAATAAACCACAACCAAGCTTGT

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[8-91] 7.36E-18
ProSiteProfiles
PDZ (IPR001478) - T[14-89] 14.014
SMART
PDZ (IPR001478) - T[16-89] 8.5E-15
Pfam
PDZ (IPR001478) - T[17-86] 7.4E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LDB3_HUMAN 45.783 % 82.8 6.6E-19
PDLI3_HUMAN 37.209 % 77.8 2.68E-17
PDLI1_HUMAN 35.606 % 81.6 7.09E-19