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  1. Transcript 'KH2012:KH.C10.365.v1...' > 
  2. Clone 'cign070b09' > 
  3. Transcript 'Cisavi.CG.ENS81.R49....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R49.2860320-2864263.17500.t

Possible name(s)

LDB3; PDLIM1; PDLIM3

Gene model

Cisavi.CG.ENS81.R49.2860320-2864263

Location

R49 [2,860,706 / 2,864,263]

Sequences

Amino acid sequence

Length: 241

>Cisavi.CG.ENS81.R49.2860320-2864263.17500.p
MATPRIQTSVTLFGSPPWGFRISGGKEYNQPLVFTRITPGSLAARSGLTSGDVLIAVNGQ
HVADMTQDICETKIKQAVGSIQFVIQKNAAVMSQNASGEVVLESDRSVYVPRPTITSKNR
SMPMTPQSASGSVPEFDPSVLKRSATSKQAVVMKGPGSSKVVHAQYNTPMGMYSNDNIMD
TVQAQAQSKGVSLPGASTTATSLDPDSAVFREVHRQSAGRGKSNQSRSFKMLQTIVDVDS
V

Nucleotide sequence

Length: 907

>Cisavi.CG.ENS81.R49.2860320-2864263.17500.t
CGGGTAATAACAAGAGCGACTGGAAGTGCGAAAGACATTCTAAATAACAATGGCGACCCC
AAGAATACAAACGTCAGTAACACTATTTGGTTCCCCACCATGGGGATTCCGGATTTCTGG
CGGTAAAGAATACAACCAACCTCTTGTATTCACACGGATTACCCCAGGAAGCTTAGCGGC
GCGATCTGGTCTAACTTCCGGCGATGTCTTAATAGCCGTGAACGGGCAACACGTAGCGGA
TATGACGCAAGATATATGCGAAACGAAGATTAAACAAGCCGTCGGCTCCATTCAATTCGT
TATACAAAAGAATGCTGCTGTTATGTCACAGAATGCTAGCGGTGAGGTCGTGTTGGAATC
TGATCGAAGTGTGTATGTCCCGCGGCCAACCATTACGTCAAAGAATCGGTCGATGCCAAT
GACCCCACAAAGCGCAAGTGGTTCGGTGCCGGAGTTCGATCCATCTGTGTTGAAACGATC
CGCAACGTCCAAGCAAGCAGTCGTGATGAAAGGACCTGGTTCATCGAAAGTTGTGCACGC
ACAGTACAACACACCAATGGGAATGTATTCCAACGATAATATCATGGACACAGTTCAAGC
ACAAGCACAATCTAAGGGGGTTTCCCTTCCCGGAGCCAGCACTACGGCCACATCGCTTGA
TCCGGATTCAGCCGTCTTCCGGGAGGTACATCGTCAATCCGCCGGGAGGGGTAAATCAAA
TCAGTCCCGCAGTTTCAAAATGCTGCAAACCATCGTAGACGTAGATTCGGTTTAAATTTG
AAGAAACTCGCTGGACATTTTGCGTTGCAATTTTATATTGTCTATTATGACGATATCAAT
ACACACATTGTTATAACGAAGACTTTGTTGAAGTATGAAAACAATAAAATATGTTCAGAT
TGCGGTG

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[8-91] 1.45E-17
ProSiteProfiles
PDZ (IPR001478) - T[14-89] 14.014
SMART
PDZ (IPR001478) - T[16-89] 8.5E-15
Pfam
PDZ (IPR001478) - T[17-86] 1.5E-13
Pfam
DUF4749 (IPR031847) - T[160-238] 9.4E-19
SMART
Zasp-like_motif (IPR006643) - T[160-185] 2.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LDB3_HUMAN 31.071 % 101 1.2E-24
PDLI3_HUMAN 34.749 % 124 1.24E-33
PDLI1_HUMAN 29.167 % 92.8 2.95E-22