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TRANSCRIPT CARD

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  1. Clone 'ma340n11' > 
  2. Transcript 'KH2012:KH.C5.358.v2....' > 
  3. Clone 'AHC0AAA189YG19' > 
  4. Transcript 'Harore.CG.MTP2014.S1...' > 
  5. Transcript 'Cisavi.CG.ENS81.R49....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R49.295837-301508.12486.t

Possible name(s)

OPN1LW; OPN1MW2; OPN1MW3

Gene model

Cisavi.CG.ENS81.R49.295837-301508

Location

R49 [295,836 / 301,508]

Sequences

Amino acid sequence

Length: 336

>Cisavi.CG.ENS81.R49.295837-301508.12486.p
NPYATTDSGWVPEHIEIANRSTYSGLCVFMSFVFVLAVPLNLLVIVATYKNKDLRRPINY
IIVNLAVADLTCSVVGGLLGVLNNGAGYYFLGKSVCIFEGYVMSVTGVCGILSITVMAFE
RYFVVCKPFGQTNLKWSHAITGIVFTWTWSVIWHTPGLFFWNGYEPEGFGTSCAPNWFSQ
QKSERIFIFAYFAFCFLTPLTIIFACYLKLILFIRKVSKKSMVNEADRRDFEVTRMVFVM
IAAFLICWLPYGCLSMYNAIHPDNLLSYGIGSVPAFFAKTATIYNPIIYMGLNKKFRDGV
IRMLFKGRNPWLDGRNTTSSTSTRAQGSLINREVDI

Nucleotide sequence

Length: 1,011

>Cisavi.CG.ENS81.R49.295837-301508.12486.t
AACCCTTATGCGACGACAGACAGCGGATGGGTACCTGAACATATTGAGATCGCCAACCGC
TCGACATACAGTGGCCTCTGCGTGTTCATGTCATTTGTTTTTGTGCTGGCGGTACCCCTT
AACCTACTGGTGATTGTCGCAACTTACAAAAACAAGGACCTTCGCCGTCCTATCAACTAC
ATCATTGTAAATCTTGCGGTTGCCGATTTGACCTGCAGTGTCGTCGGTGGACTACTGGGT
GTGCTCAACAACGGTGCTGGGTATTATTTTCTGGGCAAGAGTGTCTGCATCTTTGAGGGA
TACGTCATGTCTGTTACAGGGGTGTGTGGGATTCTATCTATTACGGTGATGGCGTTTGAA
AGATATTTCGTCGTCTGTAAGCCTTTCGGGCAAACGAATTTGAAATGGAGCCACGCCATA
ACAGGTATTGTATTCACTTGGACGTGGTCGGTTATATGGCACACACCCGGCTTGTTTTTT
TGGAATGGTTACGAACCCGAAGGATTCGGGACCAGTTGCGCGCCCAACTGGTTTAGTCAA
CAAAAAAGTGAACGAATATTCATCTTTGCCTACTTCGCGTTCTGCTTCTTAACCCCGCTG
ACCATAATATTTGCATGTTACTTGAAGCTCATACTGTTCATAAGGAAGGTATCCAAAAAA
AGCATGGTGAACGAAGCTGACCGCAGAGACTTTGAAGTAACGCGTATGGTCTTCGTTATG
ATTGCCGCTTTTTTAATCTGCTGGCTTCCGTACGGGTGTCTTTCAATGTACAATGCCATA
CACCCCGATAACTTGTTAAGTTACGGAATTGGTTCTGTCCCGGCTTTCTTCGCCAAAACT
GCAACAATATACAACCCTATAATATACATGGGCCTCAATAAAAAGTTCCGGGATGGGGTG
ATCAGAATGCTTTTCAAAGGACGAAATCCCTGGCTTGATGGGCGAAATACCACGTCGTCT
ACGAGTACAAGGGCACAGGGAAGCTTAATTAACCGTGAGGTAGATATCTAA

InterProScan

PRINTS
GPCR_Rhodpsn (IPR000276) - T[25-49] 1.8E-35 - T[58-79] 1.8E-35 - T[103-125] 1.8E-35 - T[138-159] 1.8E-35 - T[188-211] 1.8E-35 - T[233-257] 1.8E-35 - T[271-297] 1.8E-35
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[40-289] 36.28
Pfam
GPCR_Rhodpsn (IPR000276) - T[41-289] 1.6E-40
ProSitePatterns
GPCR_Rhodpsn (IPR000276) - T[109-125] .
ProSitePatterns
Retinal_BS (IPR027430) - T[273-289] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OPSR_HUMAN 39.744 % 243 1.89E-78
OPSG3_HUMAN 40.385 % 242 5.27E-78
OPSG_HUMAN 40.385 % 242 5.27E-78