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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S244...' > 
  2. Clone 'ciad096d01' > 
  3. Region 'REG00000099' > 
  4. Transcript 'Cisavi.CG.ENS81.R498...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R498.38245-42936.01607.t

Possible name(s)

GMDS; TGDS; UXS1

Gene model

Cisavi.CG.ENS81.R498.38245-42936

Location

R498 [38,244 / 42,936]

Sequences

Amino acid sequence

Length: 346

>Cisavi.CG.ENS81.R498.38245-42936.01607.p
MSDQICKRLNGDTDGEEAKSGKKKALVTGITGQDGSYLAEHLYADRATHKEGSMILHYGD
LTDSSCLVKIINQVKPHEIYNLGAMSHVKVSFDLAEYTADVDGVGTLRLLDAIRTCGMAD
SIRFYQASTSEMFGKVQEIPQKETTPFYPRSPYAAAKVYAYWIVVNYREAYGMHASNGIL
FNHESPRRGFNFVTRKITRSVAKIHLGLQEYMTLGNLDSKRDWGHARDYVKGMWMMMQHD
EPGDYVLSTNETHSVREFVEEAFGHVGVAIEWQGKGVDEIGVDKATGTKRVMISERYYRP
TEVEFLLGDYSKAQKVLGWKPDIKFNELVKEMVDADISLMKKNSNA

Nucleotide sequence

Length: 1,725

>Cisavi.CG.ENS81.R498.38245-42936.01607.t
GTCGGGTGGGTGCGGAAACATATGCTGAACCATGAAATATTAACGACCATCCACCCGTAA
TGAGAAGTCCCCCGAAATAGCCGCCGGCCTATCCTGCTGACGTTGATGCGCGGTCATGCG
GAACAGCCTTGTTTGATTTCCGAAACCCAATTTCCACGAAAAGATTGTTGAGCACTATAG
GTAGTCGGTAGCAGATTAGATAAGCTGATTGAGACTTATACGTGGTAATAGAAGTACAGT
CGTTTTTGTGATTATTTTAAAATATGTCTGACCAAATTTGTAAACGTTTGAACGGCGACA
CAGATGGCGAAGAAGCTAAAAGTGGAAAGAAAAAAGCGCTGGTAACAGGTATAACTGGCC
AGGATGGTTCATACTTGGCCGAACACTTGTACGCCGATCGCGCCACACATAAGGAGGGAA
GCATGATTCTGCACTACGGCGACCTTACAGACAGCAGTTGTCTCGTCAAGATTATTAACC
AGGTGAAACCGCACGAGATCTACAACCTGGGTGCGATGAGTCACGTGAAGGTATCGTTCG
ACCTGGCTGAGTACACCGCTGATGTGGATGGGGTTGGGACGCTGAGGTTGCTTGATGCGA
TCCGCACATGCGGGATGGCAGATTCCATCAGGTTCTACCAAGCTTCGACCAGTGAGATGT
TCGGCAAGGTCCAGGAAATCCCCCAAAAAGAGACGACCCCATTCTACCCCCGGTCCCCAT
ACGCGGCAGCGAAGGTCTACGCGTACTGGATTGTGGTGAACTACAGAGAAGCATACGGGA
TGCACGCGAGCAATGGGATCCTCTTCAACCACGAGAGCCCTCGACGAGGATTCAACTTCG
TCACCAGGAAGATAACGAGGAGTGTCGCGAAGATTCACCTCGGACTGCAAGAATACATGA
CGCTGGGCAACCTGGACTCGAAGCGAGATTGGGGCCACGCGAGGGATTACGTGAAAGGGA
TGTGGATGATGATGCAACATGATGAACCCGGGGATTACGTGTTGTCGACGAACGAGACGC
ACAGCGTGCGGGAATTTGTGGAGGAAGCGTTCGGCCACGTCGGAGTCGCCATCGAGTGGC
AGGGGAAGGGGGTCGACGAGATAGGAGTGGACAAGGCGACGGGCACGAAGCGTGTGATGA
TCAGCGAGCGATATTATCGACCAACTGAGGTGGAATTCCTCCTGGGGGATTACAGCAAGG
CGCAGAAGGTGTTGGGTTGGAAACCCGACATCAAGTTCAACGAGTTGGTGAAAGAGATGG
TCGACGCAGACATCTCGCTCATGAAGAAGAATTCGAACGCTTAGTTACCATGGGAACCGC
AACGGTGTCCCCAACTGACATTTTGACCCCAGTATCGAAGCTTTTTGTCCGAACCCCTTT
TTAACCCCCCAGATTATTAGTCCCAGTATTTTGCACTTCTTGCGCAGTAGTAATATGTAT
ATGGCGCTCCTACTGTACAACACATAGCATGGGCGACCATGGTTCTCTTATGCAGCAGTT
TCTTCAAAAGTGCTCTTTTCTTCATTTTCGTGCTTCGTTCTTCAAAACACAATTTTAGCA
TTTTTCTACAAAGCGTTGTGTTACATCACAATGGCCCCACACCCTGTATCTTCACGCGTG
TACTTGTGTTGTGCTTTTTTTGATTGTGATGTCATACTTAGTTTTCCACTTTACCATGTA
CCAGAGCTTTGTCGTAGTTATTCCAATAAACCCCATATTATTCCA

InterProScan

PANTHER
GDP_Man_deHydtase (IPR006368) - T[14-42] 3.6E-156 - T[40-344] 3.6E-156
Hamap
GDP_Man_deHydtase (IPR006368) - T[23-342] 50.423
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[23-337] 4.14E-72
Pfam
NAD(P)-bd_dom (IPR016040) - T[40-332] 2.7E-134
TIGRFAM
GDP_Man_deHydtase (IPR006368) - T[40-339] 3.4E-155

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GMDS_HUMAN 64.208 % 493 2.35E-176