- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C12.191.v6...' >
- Transcript 'Cisavi.CG.ENS81.R5.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R5.2700006-2716861.06078.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R5 [2,700,286 / 2,716,179]
Amino acid sequence
Length: 323
>Cisavi.CG.ENS81.R5.2700006-2716861.06078.p
MHRFARFLDFPLLRWWNWFWFCIALDGTTIRRLREEIQIGICSLPCPAVSTAVVEPYNSI
LTTHTTLEHSDCAFMVDNEAIYDICRRNLDVDRPSYTNLNRLIGQIVSSITASLRFDGAL
NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVGEITNACFEPCNQMVKCDPR
HGKYMACCMLYRGDVVPKDVNAAIACIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL
AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL
EKDYEEVGLDSGDGDGEDGEDEY
Nucleotide sequence
Length: 1,145
>Cisavi.CG.ENS81.R5.2700006-2716861.06078.t
AAGGAGATTGTCGACGTTGTTCTCGACCGTATCCGAAAGCTGTCGGATCAATGCACCGGT
TTGCAAGGTTTCTTGATTTTCCACTCCTTCGGTGGTGGAACTGGTTCTGGTTTTGCATCG
CTCTTGATGGAACGACTATCCGTAGATTACGGGAAGAAATCCAAATTGGAATTTGCAGTT
TACCCTGCCCCGCAGTGTCGACGGCAGTCGTTGAGCCTTACAACTCGATTCTTACCACCC
ATACAACGCTTGAACATTCCGATTGTGCGTTTATGGTTGATAACGAGGCAATCTATGACA
TATGTCGTCGTAACTTGGACGTGGACCGTCCATCTTACACTAATCTCAACCGGTTGATTG
GTCAGATCGTGTCTTCGATCACAGCTTCGCTACGTTTCGATGGAGCTCTAAATGTAGACT
TGACAGAATTCCAAACCAATTTGGTGCCGTACCCTCGAATACATTTTCCGTTGGTCACCT
ACGCTCCGGTCATATCGGCCGAAAAAGCTTACCACGAACAGCTATCCGTTGGTGAGATTA
CCAACGCTTGCTTCGAGCCTTGTAACCAGATGGTTAAATGTGATCCTCGTCATGGAAAGT
ACATGGCTTGCTGTATGCTGTACCGTGGAGACGTTGTACCGAAGGATGTCAATGCTGCGA
TTGCTTGCATCAAAACAAAGCGAACTATTCAGTTTGTGGACTGGTGCCCGACTGGATTCA
AGGTTGGGATCAACTACCAACCACCAACCGTGGTACCAGGTGGTGACTTGGCAAAAGTTC
AACGAGCAGTCTGCATGTTGAGTAACACGACCGCCATCGCAGAGGCTTGGGCTCGTCTCG
ACCACAAGTTCGATTTGATGTACGCCAAGCGTGCATTTGTTCACTGGTATGTCGGTGAAG
GTATGGAGGAGGGGGAATTCTCCGAAGCCCGGGAGGATCTTGCTGCATTGGAGAAGGATT
ACGAAGAAGTTGGGTTGGACTCTGGAGATGGTGATGGGGAAGATGGAGAAGATGAATACT
AAATCGGATTTTAATTTATTTGTCCTTTTACTTTCCTTTCTCTTTACCTAGCTTATAGCT
TGGTGATTTTGTTTCAGATATTCGAGTTGAGGTTTCAAATACATCAAATTAGGACATTGC
TTAAA
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[4-118] 5.6E-4 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[20-140] 4.2E-42 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[30-117] 1.57E-25 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[35-85] 3.9E-9 |
| PANTHER |
Tubulin (IPR000217) - T[42-318] 2.9E-198 |
| PRINTS |
Tubulin (IPR000217) - T[50-63] 3.0E-27 - T[64-84] 3.0E-27 - T[252-280] 3.0E-27 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[86-98] 3.8E-72 - T[146-161] 3.8E-72 - T[193-214] 3.8E-72 - T[219-232] 3.8E-72 - T[232-251] 3.8E-72 - T[257-273] 3.8E-72 - T[294-310] 3.8E-72 |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[118-308] 4.58E-86 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[120-265] 1.1E-56 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[135-263] 2.0E-50 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[141-255] 5.4E-66 |
| Gene3D |
Tubulin_C (IPR023123) - T[256-309] 2.4E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 96.255 % | 541 | 0 |
| TBA3D_HUMAN | 96.255 % | 541 | 0 |
| TBA1C_HUMAN | 92.754 % | 541 | 0 |