- Transcript 'Boleac.CG.SB_v3.S680...' >
- Transcript 'Cisavi.CG.ENS81.R54....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R54.139072-143987.08066.t
Possible name(s)
SMAD1; SMAD2; SMAD3
Gene model
Location
R54 [139,071 / 143,987]
Amino acid sequence
Length: 431
>Cisavi.CG.ENS81.R54.139072-143987.08066.p
FYKAFVLSQFFRMLQFTPPVVKELLGWKRGEMSAQDEKFAEKAIKSLVKKLKKSGGLDDL
KKAVTKQSIDTKCVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVEKCEF
AFQLKRDEVCVNPYHYTRVETPALPPILVPRQSEPIPAEYPPLDDWSIVPENATYEPRNF
TIPESPPPGYMSEDSEFSESGSNLSSPGPPGTFSGSASSSNEDMQSVAYHEPPFWCSISY
YELKQHIGEPFHATQSSLTVDGFTDPSNAERFCLGLLSNINRTQHVEITRRHVGKGVRLY
YIAGEVFAECLSDSAIFVQSPNCNRRYGWHPATVVKIPPGCHLKIFNNQVHLEFAALLSQ
SVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCWIEMHLNGPLQWLDKVLQQM
GAPHIPCSSMS
Nucleotide sequence
Length: 1,508
>Cisavi.CG.ENS81.R54.139072-143987.08066.t
TTCTATAAAGCTTTTGTTTTGTCACAATTTTTTAGAATGTTGCAGTTCACACCTCCTGTT
GTTAAGGAGCTCCTAGGTTGGAAACGTGGAGAGATGTCGGCCCAGGATGAAAAGTTTGCG
GAGAAAGCAATCAAAAGTTTAGTGAAGAAGTTAAAGAAGAGTGGAGGCTTGGATGACTTG
AAAAAAGCAGTGACGAAGCAGTCTATCGATACTAAGTGTGTAAAGATACCCCGCTCGTTG
GATGGCAGGTTGCAGGTGTCCCACAAGAAATCTCTCCCCCATGTATTGTATTGTCGATTG
TGGAGGTGGCCCGATCTTCGCAACCATCATGAGTTGCGACCTGTAGAGAAATGCGAGTTC
GCATTCCAACTCAAGCGCGATGAGGTATGTGTGAACCCCTACCACTATACCCGGGTAGAA
ACCCCAGCCCTACCCCCAATACTGGTGCCTCGGCAATCGGAACCTATCCCTGCAGAATAC
CCACCCCTAGATGATTGGTCCATCGTACCAGAGAACGCAACATATGAACCAAGGAACTTC
ACCATCCCTGAGAGTCCACCACCCGGCTATATGAGTGAGGACAGCGAGTTCAGTGAATCT
GGCTCCAATTTGTCAAGTCCTGGTCCACCTGGGACCTTCTCAGGTTCAGCAAGTTCAAGC
AATGAGGACATGCAATCGGTGGCTTACCACGAACCTCCTTTCTGGTGTTCCATATCCTAC
TATGAACTAAAACAGCACATTGGGGAGCCATTTCATGCCACACAATCTTCGCTAACAGTG
GATGGATTCACTGATCCTTCCAACGCTGAGCGGTTCTGTCTCGGTCTTCTCTCCAACATT
AACCGAACACAGCACGTCGAGATCACAAGGAGGCATGTAGGGAAAGGTGTCAGGCTGTAC
TACATTGCTGGGGAAGTGTTTGCAGAATGCTTGAGTGACAGCGCGATATTCGTGCAAAGC
CCCAACTGCAACCGCCGATATGGCTGGCATCCAGCCACTGTTGTCAAGATTCCACCTGGA
TGTCATCTTAAGATCTTCAACAACCAGGTCCACTTAGAATTTGCAGCGTTGCTGTCACAA
TCTGTAAACCAAGGGTTTGAAGCAGTGTACCAACTCACCCGGATGTGTACGATACGAATG
AGCTTTGTTAAGGGTTGGGGTGCAGAATATAGACGTCAACATGTCACATCCACCCCATGT
TGGATTGAGATGCATTTGAACGGTCCATTGCAGTGGTTGGACAAAGTCCTTCAGCAAATG
GGAGCACCACATATACCCTGCTCCAGTATGTCGTAACACCACCTGTCAATCTTCCACTTG
TACATATTTCTCCATTGTGCCATCAAGATTTATTCATTGTACCCATCCAGCATCAGAAGG
AACAACAGAATGTATTTGGCCAAATGAACGTAGTTTGTGTCAACATATTTTTTTATTTTA
AATCTTTGTTTAAAGAACTCTGCACGGCATGTTGTATATCCCTTTATTGCACTATTAACT
CTGTACAT
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[11-153] 1.8E-63 |
| PANTHER |
Dwarfin (IPR013790) - T[13-206] 4.2E-222 - T[216-431] 4.2E-222 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[19-145] 35.324 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[20-140] 1.96E-46 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[35-143] 1.0E-54 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[41-140] 1.3E-39 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[207-421] 5.03E-87 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[226-431] 9.4E-92 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[233-407] 1.8E-92 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[234-407] 1.3E-73 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[235-431] 71.897 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD3_HUMAN | 72.834 % | 624 | 0 |
| SMAD2_HUMAN | 65.812 % | 595 | 0 |
| SMAD1_HUMAN | 54.545 % | 491 | 1.52E-172 |