- Molecular Tool 'Hl-GATAa-WRPW' >
- Transcript 'Moocul.CG.ELv1_2.S96...' >
- Transcript 'Cisavi.CG.ENS81.R54....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R54.139072-143987.08067.t
Possible name(s)
SMAD1; SMAD2; SMAD3
Gene model
Location
R54 [139,241 / 143,987]
Amino acid sequence
Length: 450
>Cisavi.CG.ENS81.R54.139072-143987.08067.p
FYKAFVLSQFFRMLQFTPPVVKELLGWKRGEMSAQDEKFAEKAIKSLVKKLKKSGGLDDL
KKAVTKQSIDTKCVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVEKCEF
AFQLKRDEVCVNPYHYTRVETPALPPILVPRQSEPIPAEYPPLDDWSIVPENATYEPRNF
TIPESPPPGYMSEDSEFSESGSNLSSPGPPGTFSGYWKMGIVTSPPPYTDATTNESGSAS
SSNEDMQSVAYHEPPFWCSISYYELKQHIGEPFHATQSSLTVDGFTDPSNAERFCLGLLS
NINRTQHVEITRRHVGKGVRLYYIAGEVFAECLSDSAIFVQSPNCNRRYGWHPATVVKIP
PGCHLKIFNNQEFAALLSQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCW
IEMHLNGPLQWLDKVLQQMGAPHIPCSSMS
Nucleotide sequence
Length: 1,395
>Cisavi.CG.ENS81.R54.139072-143987.08067.t
TTCTATAAAGCTTTTGTTTTGTCACAATTTTTTAGAATGTTGCAGTTCACACCTCCTGTT
GTTAAGGAGCTCCTAGGTTGGAAACGTGGAGAGATGTCGGCCCAGGATGAAAAGTTTGCG
GAGAAAGCAATCAAAAGTTTAGTGAAGAAGTTAAAGAAGAGTGGAGGCTTGGATGACTTG
AAAAAAGCAGTGACGAAGCAGTCTATCGATACTAAGTGTGTAAAGATACCCCGCTCGTTG
GATGGCAGGTTGCAGGTGTCCCACAAGAAATCTCTCCCCCATGTATTGTATTGTCGATTG
TGGAGGTGGCCCGATCTTCGCAACCATCATGAGTTGCGACCTGTAGAGAAATGCGAGTTC
GCATTCCAACTCAAGCGCGATGAGGTATGTGTGAACCCCTACCACTATACCCGGGTAGAA
ACCCCAGCCCTACCCCCAATACTGGTGCCTCGGCAATCGGAACCTATCCCTGCAGAATAC
CCACCCCTAGATGATTGGTCCATCGTACCAGAGAACGCAACATATGAACCAAGGAACTTC
ACCATCCCTGAGAGTCCACCACCCGGCTATATGAGTGAGGACAGCGAGTTCAGTGAATCT
GGCTCCAATTTGTCAAGTCCTGGTCCACCTGGGACCTTCTCAGGTTATTGGAAGATGGGT
ATAGTAACCTCTCCTCCCCCTTACACAGATGCAACAACAAATGAGTCAGGTTCAGCAAGT
TCAAGCAATGAGGACATGCAATCGGTGGCTTACCACGAACCTCCTTTCTGGTGTTCCATA
TCCTACTATGAACTAAAACAGCACATTGGGGAGCCATTTCATGCCACACAATCTTCGCTA
ACAGTGGATGGATTCACTGATCCTTCCAACGCTGAGCGGTTCTGTCTCGGTCTTCTCTCC
AACATTAACCGAACACAGCACGTCGAGATCACAAGGAGGCATGTAGGGAAAGGTGTCAGG
CTGTACTACATTGCTGGGGAAGTGTTTGCAGAATGCTTGAGTGACAGCGCGATATTCGTG
CAAAGCCCCAACTGCAACCGCCGATATGGCTGGCATCCAGCCACTGTTGTCAAGATTCCA
CCTGGATGTCATCTTAAGATCTTCAACAACCAGGAATTTGCAGCGTTGCTGTCACAATCT
GTAAACCAAGGGTTTGAAGCAGTGTACCAACTCACCCGGATGTGTACGATACGAATGAGC
TTTGTTAAGGGTTGGGGTGCAGAATATAGACGTCAACATGTCACATCCACCCCATGTTGG
ATTGAGATGCATTTGAACGGTCCATTGCAGTGGTTGGACAAAGTCCTTCAGCAAATGGGA
GCACCACATATACCCTGCTCCAGTATGTCGTAACACCACCTGTCAATCTTCCACTTGTAC
ATATTTCTCCATTGT
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[11-153] 1.9E-63 |
| PANTHER |
Dwarfin (IPR013790) - T[13-450] 1.8E-226 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[19-145] 35.324 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[20-140] 2.09E-46 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[35-143] 1.0E-54 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[41-140] 1.4E-39 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[223-440] 4.6E-90 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[248-450] 3.4E-94 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[255-426] 4.1E-96 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[256-426] 3.0E-76 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[257-450] 72.385 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD3_HUMAN | 70.721 % | 624 | 0 |
| SMAD2_HUMAN | 64.256 % | 595 | 0 |
| SMAD1_HUMAN | 56.41 % | 504 | 1.93E-177 |