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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S19...' > 
  3. Transcript 'Cisavi.CG.ENS81.R54....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R54.2615028-2628400.17305.t

Possible name(s)

DNA2; IGHMBP2; UPF1

Gene model

Cisavi.CG.ENS81.R54.2615028-2628400

Location

R54 [2,615,036 / 2,628,391]

Sequences

Amino acid sequence

Length: 997

>Cisavi.CG.ENS81.R54.2615028-2628400.17305.p
GDIVNLVPENTGAVKGNCTVVDDKNNILVLHPDALISGTTVSNGLGCLRRAILNERFKIP
TNADNISPVMLVGTIVHSVFQSAVKLTSTVTRDSLLKLAKDAVSSRRYFSDMYVGLTMNT
DSKTVLAQVESYIPQIESWIKEYKRDRPTTGVGSIDFQLPITAVPDHLKPARGSTVRYNA
STLNENVWPRFGLKGKIDLTGKFRIKNNKTQAIEHSILPLELKTGKDSHSMEHHVQVVAI
YTMFCNERRNKDGRPPDSLPAGLLLYLKNVKSSCVPLKRADQTGVLLLRNKIADYLAKTT
IKKSTTSDSTFIPSNFPPTIDNTRSCQRCSQLRNCALMSLKAAIDQTSELMVLLSQIFEH
LTDTDLAYFKHWATCTFLEEQETNKKEKQKRFWLKTANERMSEGKCITNLEIAGSSQPHS
DLPDSMVQTFKRYVSDCGMGNTFQIGEMVLISGTEPNHIAMATGVVHAINQSFISITTDR
CVPTFWLYFFIDRHVWLGGISVQSALSNLSILMSDNPQCNMATCPQSSLILCFKIVKIMT
NFFLLFIFPPREPSFVKNLDFVPRSAKDEVGRMLRGLNRTQRQAIKRVLLSKDYTLVVGM
PGSGKTTTIVAMIRILLLCGLRVLVTSYTHSAVDNLLIKLIKYKTKFLRLGRSGQVHPSV
HPYTEEGLSLNMKTPRELLKLYDESRVVACTCLAVTSHAFFAIPSQNRPIFDVCIVDEAS
QIAQPACLAPLLHSRRFVLVGDHLQLPPLVVSQEARKMGADESLFRRLTSHKPALCELTL
QYRMNKDIMELSNHVTYEGRLECAHPSVADSTVKLDNYESMKTLMTDDTKWLNRAIDPKI
SVLFLDTSQVSFVEKFNQGIHNTGEAKIISALTKWLIKAGCNASRIGIIAPFRKQLKAIE
EKLNQIEGWCFIKEMFRIINTVDKYQGRDKSVILVSFVRSKEEALGEKLLNDWRRLNVAI
TRAKHKLVMVGCTRSLMEYDPCKKIIEYVRSKDLVHF

Nucleotide sequence

Length: 2,991

>Cisavi.CG.ENS81.R54.2615028-2628400.17305.t
GGAGATATTGTGAACCTGGTTCCAGAGAACACTGGTGCAGTGAAGGGCAATTGTACCGTG
GTGGACGACAAAAACAACATTTTAGTCCTACACCCAGATGCCTTAATTAGTGGGACCACA
GTTTCTAATGGACTTGGCTGTTTGCGTCGGGCTATTTTAAATGAACGATTTAAGATTCCA
ACAAACGCTGACAACATAAGTCCGGTGATGCTGGTTGGAACCATTGTTCACTCTGTGTTC
CAATCTGCTGTGAAATTAACCTCCACTGTGACAAGGGATTCTCTCTTGAAATTGGCCAAA
GATGCCGTGTCAAGTAGAAGATATTTTTCAGACATGTACGTTGGGCTTACAATGAACACC
GATTCGAAAACAGTCCTTGCTCAAGTTGAGAGCTATATTCCACAAATTGAATCGTGGATC
AAGGAATACAAGCGAGACCGACCAACCACCGGCGTTGGTTCTATCGACTTTCAACTCCCG
ATTACAGCCGTACCTGACCACCTTAAACCAGCAAGGGGCTCAACTGTGAGATATAATGCT
AGCACATTGAATGAGAATGTTTGGCCTCGTTTTGGATTAAAAGGAAAAATCGATTTAACT
GGAAAATTTCGGATCAAAAACAACAAAACGCAAGCGATAGAACACTCCATTCTTCCTCTG
GAATTAAAGACGGGAAAAGACAGTCATTCCATGGAGCATCATGTTCAGGTAGTCGCAATC
TACACCATGTTTTGCAATGAGAGACGAAACAAAGATGGCCGCCCACCCGATTCTCTACCA
GCTGGTCTGCTGCTCTACTTGAAAAATGTGAAATCAAGTTGCGTGCCTTTAAAACGTGCC
GACCAAACTGGCGTTTTGCTCTTAAGAAACAAAATCGCAGACTACCTCGCTAAAACCACA
ATAAAGAAGAGTACCACCTCAGATAGCACATTCATTCCAAGTAACTTTCCACCCACCATT
GATAACACGAGATCGTGCCAAAGATGCTCTCAGCTACGCAACTGTGCCCTCATGAGCCTC
AAGGCAGCTATCGACCAAACCTCAGAGTTAATGGTTTTGCTGAGTCAGATTTTCGAACAT
CTAACCGACACTGACTTGGCGTATTTCAAGCACTGGGCGACTTGTACATTTTTAGAGGAA
CAGGAAACAAATAAGAAGGAAAAACAAAAGCGATTTTGGTTAAAAACCGCGAATGAAAGG
ATGAGCGAAGGCAAGTGCATCACCAACCTAGAAATAGCAGGCTCCTCACAACCCCATTCC
GACCTACCTGATTCAATGGTGCAGACATTTAAAAGGTACGTCAGCGACTGTGGCATGGGA
AACACGTTCCAAATTGGCGAGATGGTCTTGATCAGTGGCACTGAGCCGAACCACATCGCC
ATGGCAACGGGAGTGGTACATGCGATCAACCAATCGTTTATCAGTATTACCACGGACAGG
TGCGTGCCGACATTTTGGTTGTATTTTTTTATCGACAGGCACGTCTGGCTGGGTGGGATT
TCAGTTCAATCTGCTCTCAGCAATCTCTCTATATTGATGTCAGACAACCCACAGTGCAAT
ATGGCAACTTGCCCGCAAAGTTCACTTATCTTATGTTTCAAAATTGTAAAAATCATGACA
AATTTTTTTTTATTATTTATTTTCCCCCCTAGGGAACCATCGTTTGTGAAAAACCTTGAT
TTTGTTCCGCGATCCGCCAAAGATGAGGTGGGTCGAATGTTACGAGGGTTAAATCGTACC
CAGCGACAAGCCATTAAGCGGGTTCTGCTCTCTAAAGACTACACCCTCGTAGTAGGTATG
CCGGGTAGTGGTAAAACCACCACTATTGTTGCAATGATCAGGATCTTGCTGCTTTGTGGT
TTACGTGTGCTTGTCACGTCGTACACACATTCAGCCGTTGACAACCTTCTTATTAAACTC
ATCAAGTACAAGACAAAGTTCTTACGGTTGGGCCGCTCAGGTCAGGTACACCCCAGCGTG
CACCCATACACTGAAGAAGGGTTGTCACTCAACATGAAAACGCCGCGTGAATTGCTCAAA
TTATATGACGAATCAAGAGTTGTAGCGTGCACATGTTTAGCGGTCACCTCCCATGCTTTC
TTCGCAATCCCCTCGCAAAATCGTCCGATCTTCGACGTTTGTATCGTAGATGAGGCATCT
CAGATCGCTCAGCCTGCTTGCTTGGCGCCGCTCCTGCATTCCCGGCGATTTGTGCTCGTG
GGGGATCATCTTCAACTTCCCCCACTAGTGGTCAGTCAAGAGGCAAGGAAAATGGGAGCG
GATGAAAGTTTGTTCAGAAGGTTAACTTCACATAAACCGGCGCTGTGTGAACTCACATTG
CAGTATCGAATGAACAAAGACATTATGGAGTTGAGCAACCACGTGACTTACGAGGGAAGG
TTGGAATGTGCCCACCCCTCCGTCGCAGATTCCACCGTCAAACTCGACAATTACGAGTCT
ATGAAAACATTGATGACTGATGACACCAAGTGGTTGAATCGCGCAATCGATCCGAAAATA
TCAGTGCTGTTTTTGGACACCTCACAAGTAAGTTTTGTTGAAAAGTTTAACCAGGGGATC
CACAACACTGGGGAAGCAAAAATTATTTCTGCTCTCACAAAATGGCTGATAAAGGCTGGG
TGCAATGCAAGTCGTATCGGTATCATCGCGCCGTTTCGCAAGCAACTCAAAGCTATTGAA
GAGAAACTCAATCAAATTGAAGGTTGGTGTTTTATTAAAGAAATGTTTAGAATAATAAAC
ACGGTGGACAAATACCAAGGCCGAGATAAAAGTGTAATTCTTGTCTCTTTCGTACGAAGT
AAGGAAGAAGCTCTTGGGGAAAAGCTCTTGAACGATTGGCGTCGATTAAATGTTGCGATC
ACTCGAGCGAAACACAAACTTGTCATGGTTGGCTGCACCCGTAGTCTGATGGAATATGAC
CCGTGCAAGAAAATTATTGAATACGTCCGATCCAAAGATCTAGTGCATTTT

InterProScan

Pfam
DNA_replication_fac_Dna2_N (IPR014808) - T[1-200] 2.1E-34
PANTHER
Dna2 (IPR026851) - T[16-990] 2.7E-185
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[573-979] 3.51E-61

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RENT1_HUMAN 28.947 % 149 1.36E-36
SMBP2_HUMAN 26.165 % 169 8.09E-43
DNA2_HUMAN 40.059 % 662 0