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  1. Clone 'cien147770' > 
  2. Transcript 'KH2012:KH.C9.770.v1....' > 
  3. Transcript 'Cisavi.CG.ENS81.R54....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R54.3583560-3589162.18916.t

Possible name(s)

OPN1SW; RGR; RRH

Gene model

Cisavi.CG.ENS81.R54.3583560-3589162

Location

R54 [3,583,559 / 3,589,162]

Sequences

Amino acid sequence

Length: 286

>Cisavi.CG.ENS81.R54.3583560-3589162.18916.p
MDFSSKRTYGIAMAALGFIAWVGYGLLFVIFAKSPDLKKKNRFLFSLAVSDLLITIHVVA
SVVASFQSEWPFGSIGCQLDAFIGMAPTFISIAGAALVAKDKYYRICKPKMVGRNYSFSI
YANWTLGIIGGLLPFFGFGQYGFETDDLSLRTGCLLDFKTVSAKYRFYIVFISLVWFVWP
LYKLTSHYIKISAKLDRFHPLMFVVPLQMLVSLLPYAIYAMISITVGVSSAPYYLVAVNN
IAAKVFIGTNPFIYIYFDPELRLACKNLFKYSSTPVQDQIQDKKDE

Nucleotide sequence

Length: 1,099

>Cisavi.CG.ENS81.R54.3583560-3589162.18916.t
CGGTTTAAAGCATTTCAGGTCTTATGCGTAGTGCTGGTACAGAACAGACAGTGTGTTGTT
TGTAACTGGCGAGCAGGTTACACTATTTTATTCTTGTTCGAATCAAAGCTTTGAAAATGG
ATTTTTCTAGCAAAAGAACTTATGGCATTGCAATGGCTGCTTTAGGCTTCATAGCCTGGG
TTGGGTATGGACTGTTGTTTGTCATATTTGCGAAGAGCCCCGACTTGAAAAAGAAAAACC
GATTCCTGTTTTCGCTGGCAGTGTCTGACCTCTTAATCACCATCCACGTTGTAGCATCGG
TTGTTGCCTCGTTTCAGTCGGAATGGCCTTTCGGAAGTATCGGCTGCCAGCTGGACGCTT
TCATTGGGATGGCTCCGACCTTCATCAGCATTGCTGGGGCGGCACTAGTGGCCAAAGACA
AATATTACAGAATCTGCAAACCTAAAATGGTTGGGCGGAACTATTCGTTTAGCATTTATG
CGAACTGGACCCTCGGAATTATAGGCGGACTGTTGCCGTTTTTCGGATTTGGTCAATACG
GCTTTGAAACGGACGATCTTTCCCTTAGAACTGGTTGTTTACTCGATTTCAAAACAGTTT
CAGCAAAGTACAGATTCTACATCGTTTTCATATCTCTTGTGTGGTTCGTTTGGCCGCTTT
ACAAGCTGACGTCACATTACATAAAAATATCCGCGAAACTTGACCGTTTCCACCCGTTGA
TGTTTGTTGTGCCTCTTCAAATGCTGGTATCCCTGCTCCCCTATGCTATTTATGCCATGA
TATCAATCACCGTTGGCGTCTCTTCTGCACCTTATTACCTCGTCGCAGTTAACAATATTG
CTGCAAAAGTGTTCATCGGAACAAACCCGTTTATTTACATTTACTTCGACCCTGAGCTAC
GACTGGCCTGCAAAAATCTATTTAAATATTCCTCGACACCGGTTCAAGACCAGATCCAAG
ATAAAAAAGATGAATAAACCACTCACTGGACGTTATTTTTGTGTGTGCACATTTGTTATG
TATTTTTGTTATATGTAAGCCCTGTGTACATTATTATCTGTGGGAATAGATCGTCAATAT
ATTGGTAGCGAATCGTTAA

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[23-254] 15.417
Pfam
GPCR_Rhodpsn (IPR000276) - T[27-195] 9.9E-21
PRINTS
GPCR_Rhodpsn (IPR000276) - T[40-61] 1.0E-9 - T[84-106] 1.0E-9 - T[169-192] 1.0E-9 - T[236-262] 1.0E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RGR_HUMAN 25.581 % 85.1 3.47E-19