Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 547

>Cisavi.CG.ENS81.R54.461275-467018.10468.p
MKAMNGAHRNLLKRRRPELCQDLEVDQVLQELIGKNIFNDIIADKVLCQPTKYKKNVEFL
NLLPGRGPLAFDAFCDALKKSNQSHLAELLVSASLDNSDRSEQFRNEVNLQSGSSSGLYN
NRDVPSFYFSSETSTPCMASTSRQINAHLTSARTGRRPRENIDHTANHAAQIYSMNQGSP
SKRQRHASISSDEQMDSIPSPADSLTNILSTTSIYDLFGHATRPLQHTTANIFSTVSNTA
FAASIGCNNTNDLTAADIADGPTHQDLLVKRSTIPFKQKNMNGSYPMNNKPIGAALIISN
EHFVPETGLDNREGGKVDRVRLEVVLRQMGFQCYVLIDGTAQEIIDTLQKFSDLEEHFYN
NCTVVAVLSHGDEGYFCGRDGRQVSIENMVDLFNNENCVALHNKPKLFFIQACRGESPDV
GVDVRDGPIKPPEGDTESSSNRGSPSSSRVRVRNKLPRTSDTFVGKATMKGFAAMRNTKH
GSWYIQALVRVLARHACDKDFLEIMTIVNNIVKQKEGCSPGSQFHRCKEMSEFQSSLSKK
LYFFPGL

Nucleotide sequence

Length: 2,131

>Cisavi.CG.ENS81.R54.461275-467018.10468.t
TACATGTTTCTTATTTTATACTGTTAATAACGTCAACCCAATTATAGAATGCTAATTATC
TGGTTTTGGGATATGGACACATGAAAGCAATGAATGGTGCACATCGCAATTTGCTTAAAC
GCAGACGACCAGAATTGTGTCAAGATTTGGAGGTGGATCAAGTACTTCAAGAATTAATTG
GGAAGAATATTTTTAACGATATCATTGCCGATAAAGTTTTATGCCAGCCTACAAAATATA
AAAAAAATGTCGAGTTTTTGAATTTGCTACCTGGCCGAGGACCCCTTGCATTTGATGCTT
TCTGTGATGCGTTAAAAAAAAGCAATCAGTCACATTTGGCAGAACTGCTTGTTTCGGCGT
CATTAGATAATTCTGATCGCTCAGAACAATTTCGAAATGAAGTTAACTTGCAGAGTGGTA
GTTCCAGTGGATTGTACAATAATCGAGACGTACCTTCCTTTTACTTCTCATCCGAAACAA
GTACACCATGTATGGCTAGTACAAGTCGTCAAATTAATGCACATTTAACTAGTGCACGAA
CAGGTAGAAGACCAAGAGAGAATATTGATCATACTGCTAACCATGCTGCTCAAATATATT
CCATGAATCAGGGATCTCCATCCAAAAGACAACGACATGCTTCTATCTCATCAGATGAGC
AAATGGATTCTATCCCGTCTCCTGCAGATTCACTTACCAATATCCTGTCTACAACATCTA
TTTATGACTTATTTGGTCATGCCACCAGGCCATTACAGCATACCACTGCCAATATATTTA
GCACTGTGTCCAACACTGCATTTGCTGCTTCTATTGGGTGTAACAATACAAATGATCTAA
CTGCTGCTGATATAGCCGATGGACCAACCCATCAAGATCTACTTGTTAAACGAAGCACTA
TTCCGTTTAAACAGAAAAACATGAACGGCAGTTATCCGATGAATAACAAGCCTATTGGAG
CTGCATTGATTATTTCCAATGAACATTTTGTGCCGGAGACTGGTTTGGATAACAGAGAGG
GAGGCAAAGTTGACCGCGTAAGACTGGAAGTGGTCTTAAGACAAATGGGATTTCAATGCT
ACGTTTTGATTGACGGTACTGCTCAAGAAATAATTGACACACTCCAGAAATTTTCCGATT
TGGAAGAACATTTCTACAACAACTGTACAGTAGTAGCGGTGCTAAGCCATGGAGATGAAG
GATATTTCTGTGGTCGTGATGGGCGACAAGTTTCAATTGAAAACATGGTTGACCTTTTCA
ATAATGAAAACTGTGTCGCTCTTCATAATAAACCCAAATTATTTTTCATCCAAGCTTGCC
GAGGGGAATCCCCAGATGTTGGAGTAGATGTACGGGATGGACCGATTAAGCCACCAGAGG
GAGACACTGAGTCTAGTTCAAACAGAGGGTCCCCATCAAGTTCAAGGGTTCGTGTACGAA
ACAAGCTGCCTCGTACATCAGACACATTTGTAGGCAAGGCAACGATGAAAGGATTCGCTG
CAATGCGAAACACGAAGCACGGGAGCTGGTACATACAAGCGCTTGTCAGGGTTTTAGCAA
GACATGCATGCGACAAAGATTTCCTAGAAATTATGACAATTGTCAACAACATAGTGAAGC
AAAAAGAGGGGTGCAGCCCTGGATCTCAGTTTCACAGGTGCAAAGAGATGTCAGAGTTCC
AGTCAAGTCTGAGCAAAAAGTTGTATTTCTTTCCTGGCCTTTAGATACCAAATAGTGTCA
TTCTAGTATGTGTGTTTTTAGGGTTGTCTTTTAATAAAAATATTTTCCTGATTTTAACTA
TTTGAAGTCATTTTTGATTTGATGATTTTACTACACTCCAAATTGCTGTATGCTGCTTTG
TTATTCCTGCCAAGTATAGTTTTGTAGCCCTTATAAACAAATATGTTGTATACATGTAAA
GTTATTGTGTGTATATTCGTTTTAACCAAATAAAACTGCCATCACTTTTGTACTATAACA
CAGATTTTGGTTGCAAATACTAAACATGCTTCAAAGAAACAATCATCCTGCAGCATCTAT
TCCAAAACTACACTGCCAAAACTTTTAATTACTGTATCCGTTACGCTGTACAAACGCTTT
AGTTGTGTTTTCTTGTGTGTTTTTTTTTGCT

InterProScan

PANTHER	Caspase_2 (IPR035702) - T[3-101] 2.5E-102 - T[220-546] 2.5E-102
ProSiteProfiles	CARD (IPR001315) - T[4-93] 16.237
SMART	CARD (IPR001315) - T[4-92] 5.7E-17
SUPERFAMILY	DEATH-like_dom_sf (IPR011029) - T[4-92] 7.53E-24
Pfam	CARD (IPR001315) - T[9-90] 8.7E-15
SUPERFAMILY	Caspase-like_dom_sf (IPR029030) - T[276-546] 1.79E-76
SMART	Pept_C14A (IPR015917) - T[284-545] 7.2E-83
CDD	Pept_C14A (IPR015917) - T[285-544] 2.52934E-86
PRINTS	Pept_C14A (IPR015917) - T[291-304] 4.6E-29 - T[312-330] 4.6E-29 - T[330-348] 4.6E-29 - T[363-371] 4.6E-29 - T[398-416] 4.6E-29 - T[474-485] 4.6E-29 - T[535-544] 4.6E-29
ProSiteProfiles	Pept_C14_p20 (IPR001309) - T[291-417] 43.556
ProSitePatterns	Caspase_his_AS (IPR016129) - T[357-371] .
ProSitePatterns	Caspase_cys_AS (IPR033139) - T[404-415] .
ProSiteProfiles	Pept_C14_p10 (IPR002138) - T[452-545] 32.152