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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.404.v2....' > 
  2. Transcript 'Cisavi.CG.ENS81.R107...' > 
  3. Clone 'cien28984' > 
  4. Clone 'cima820644' > 
  5. Transcript 'Cisavi.CG.ENS81.R54....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R54.881324-888249.12371.t

Possible name(s)

NVL; SPATA5; VCP

Gene model

Cisavi.CG.ENS81.R54.881324-888249

Location

R54 [883,242 / 888,249]

Sequences

Amino acid sequence

Length: 386

>Cisavi.CG.ENS81.R54.881324-888249.12371.p
MKLADDINYELIARLTPGFVGADILSLCREASMQAVSRALNHDNVKGTDKVYECLSDAQP
LPQQQLDGLFIETGDFEVALNNVQPSAKREGFATVPDITWDDVGALQNMREELSIAILGP
VRNPVAFASLGLSRATGVMLVGPPGCGKTMLAKAIANESGINFISVKGPELLNMYVGESE
RAVRQCFERARNSSPCVIFFDEIDSLCPRRSSMESGASARVVNQMLTELDGLESRKQVFV
VAATNRPDIIDPAILRPGRLDKVLYVGIPTADDRVQILNTITKNGSKPSISDDVNLSDLA
KDDRCSAFTGADLSALVREAALDAIRQSISHEWSVVLPQNDRNDANIKVTSRNFDAAFNK
VKSSISEQDRLMYEEMRDKFTKDLRQ

Nucleotide sequence

Length: 1,199

>Cisavi.CG.ENS81.R54.881324-888249.12371.t
CATCCTACTTGTGCTGTGTAAGGAGATGAAACTCGCAGATGACATAAACTACGAACTAAT
AGCCCGTCTAACTCCTGGTTTTGTTGGAGCTGATATTTTATCTCTATGTCGAGAAGCATC
TATGCAAGCAGTCTCCCGTGCACTTAACCACGACAACGTTAAAGGAACTGACAAGGTCTA
CGAATGTCTGTCCGACGCACAACCCCTGCCACAGCAGCAGTTGGACGGACTATTCATTGA
GACTGGTGACTTCGAGGTGGCGCTAAATAATGTGCAGCCGTCTGCAAAGAGAGAGGGCTT
CGCCACTGTGCCTGATATTACTTGGGATGATGTAGGGGCGCTGCAGAACATGAGAGAGGA
ATTATCGATAGCAATACTGGGCCCTGTGCGCAACCCGGTAGCGTTTGCCTCTCTTGGCCT
CTCCCGTGCAACAGGGGTCATGTTGGTGGGGCCACCCGGCTGTGGGAAAACCATGCTCGC
GAAAGCCATCGCTAACGAGTCTGGAATCAACTTTATATCGGTGAAAGGCCCTGAGTTGCT
CAATATGTATGTAGGTGAAAGTGAACGCGCAGTTCGTCAGTGCTTTGAGCGTGCACGCAA
TTCATCTCCATGTGTCATCTTCTTCGATGAAATTGATTCTCTCTGTCCACGAAGGTCCTC
CATGGAGAGTGGAGCAAGTGCAAGAGTAGTGAACCAGATGCTCACTGAACTCGACGGATT
GGAATCAAGGAAACAAGTGTTTGTAGTGGCTGCCACTAACCGACCCGATATTATAGATCC
GGCTATACTGAGACCTGGAAGGCTGGACAAAGTGCTCTATGTTGGAATCCCAACAGCGGA
TGACAGGGTCCAGATACTAAACACAATCACAAAGAACGGGAGCAAACCTTCAATATCGGA
TGACGTCAATCTGTCTGATCTTGCCAAGGATGATAGATGTTCGGCATTCACAGGTGCCGA
CTTATCAGCATTGGTGCGAGAAGCAGCGTTGGACGCGATACGTCAGAGTATCAGCCATGA
GTGGAGCGTAGTGCTTCCGCAGAACGATAGAAACGACGCGAATATAAAAGTCACTTCTAG
AAATTTCGATGCTGCTTTCAATAAAGTAAAGTCCTCGATATCCGAGCAGGACCGCTTAAT
GTACGAGGAGATGCGAGACAAATTCACCAAAGACCTTCGGCAATAAAACTTACATTTTA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[96-377] 4.37E-66
SMART
AAA+_ATPase (IPR003593) - T[134-270] 1.6E-23
Pfam
ATPase_AAA_core (IPR003959) - T[138-267] 1.6E-48
ProSitePatterns
ATPase_AAA_CS (IPR003960) - T[238-256] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPAT5_HUMAN 42.077 % 270 9.32E-83
TERA_HUMAN 44.892 % 285 3.48E-89
NVL_HUMAN 56.796 % 476 5.37E-162