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  1. Transcript 'KH2012:KH.C7.55.v1.C...'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Molecular Tool 'Ci-type IX-Col1α-chain MO'
  4. Transcript 'KH2012:KH.C9.26.v1.A...'
  5. Transcript 'Cisavi.CG.ENS81.R5.5...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R5.521849-529571.00818.t

Possible name(s)

EBF1; EBF3; EBF4

Location

R5 [522,867 / 529,160]

Sequences

Amino acid sequence

Length: 545

>Cisavi.CG.ENS81.R5.521849-529571.00818.p
VGLHRAHFEKQPPNNLRKSNFFHFVLALYDRQGQPVEIERSAFVGFIENETEIAGENTNN
GIQYRLQLLYQNGLRTEQDVYVRLIDSATKQSITYEGQDKNPEMRRVLLTHEIMCSRCCD
KKSCGNRNETPSDPVVIDRYFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVHVDGHVL
AVSDNMFVHNNSKHGRRARRVDPSEGKKPLLCSFTASPMIKAINPAEGWTTGGATVVIVG
DNFFDGLQVVFGSMVVWSELITQHAIRVQTPPRHLPGVVEVTLSYKNKQFCSGAPGRFVY
TALNEPTLDYGFQRLLKTIPRHPGDPERLPKEIILKRAADVMEAVISRQYASPSQMHPSS
GITPPTPHLGATPCPPSGSFVPQSASAAMAVAMNGYAAAAVSSQFVGNPDRFDNGSDSGY
SRGNSVSPRNGYSPQTTPHSLNSGSIGSMVGLTTVGAVPAPYHGPPSFNSYSTSGPTFTN
MNNSSPGIFPGSSSIFSFSPASMISAAKQKSAFAPVHRPHNSPSPMAPPNSSLVENSESL
MLTKM

Nucleotide sequence

Length: 1,635

>Cisavi.CG.ENS81.R5.521849-529571.00818.t
GTTGGACTTCACCGAGCTCATTTTGAGAAACAACCACCGAATAACTTGCGGAAGAGCAAC
TTCTTCCACTTCGTGTTGGCACTTTATGACAGACAAGGGCAGCCAGTGGAGATTGAACGA
AGCGCTTTTGTCGGGTTCATTGAAAACGAGACGGAGATAGCTGGAGAAAATACCAACAAC
GGGATTCAATATCGTCTGCAGCTGCTTTATCAAAATGGTTTACGAACCGAACAAGATGTA
TACGTCCGCCTCATCGACTCAGCAACAAAACAGTCGATCACATATGAAGGCCAGGATAAA
AATCCAGAAATGCGGCGTGTTCTCCTGACACATGAGATAATGTGCAGCCGTTGCTGTGAC
AAGAAAAGTTGTGGAAACCGAAACGAAACTCCGTCCGATCCAGTGGTAATTGACAGATAT
TTTCTCAAGTTTTTTTTGAAATGCAACCAAAATTGCCTCAAGAATGCAGGAAACCCAAGA
GATATGAGGCGATTTCAGGTTGTCGTATCAACAACTGTTCATGTCGATGGCCATGTTCTT
GCGGTGTCTGACAATATGTTTGTCCACAACAATTCGAAACATGGTCGCAGGGCGAGAAGA
GTCGATCCATCAGAAGGTAAAAAGCCGCTATTATGTTCTTTTACAGCCTCTCCAATGATT
AAAGCAATAAACCCTGCCGAGGGCTGGACGACCGGAGGTGCCACAGTGGTCATCGTTGGC
GACAACTTTTTTGATGGTCTTCAGGTCGTTTTTGGTTCGATGGTCGTGTGGAGTGAGTTA
ATCACGCAACACGCCATCAGAGTGCAAACTCCGCCACGCCATCTACCAGGCGTTGTAGAA
GTAACTTTGTCGTACAAGAACAAACAGTTCTGCAGTGGTGCACCTGGACGCTTTGTATAC
ACAGCGTTGAACGAACCTACTCTTGACTATGGATTTCAGAGATTACTTAAAACAATCCCG
AGACATCCCGGCGACCCAGAAAGATTACCGAAGGAAATTATTCTGAAACGAGCAGCTGAC
GTAATGGAGGCGGTTATCAGTCGACAGTATGCATCACCGAGTCAGATGCATCCTTCATCC
GGTATCACTCCTCCAACACCTCATTTAGGTGCCACCCCATGTCCTCCGTCGGGCAGCTTT
GTTCCACAGTCAGCGAGCGCAGCAATGGCTGTTGCAATGAACGGTTATGCGGCAGCGGCA
GTGTCGTCTCAGTTTGTTGGAAACCCCGATCGTTTCGACAATGGAAGTGATTCAGGTTAT
TCACGAGGCAACAGTGTGTCCCCTCGAAACGGGTATTCCCCCCAAACAACCCCACACAGC
CTGAACAGCGGGTCTATAGGAAGCATGGTGGGCCTAACAACAGTGGGTGCGGTACCAGCC
CCCTACCACGGACCCCCATCTTTTAACAGCTATTCGACTTCGGGTCCAACTTTCACGAAT
ATGAACAACTCCTCCCCTGGTATATTTCCAGGCTCAAGTAGCATATTTAGTTTCTCACCC
GCCAGCATGATATCAGCAGCGAAGCAGAAAAGCGCGTTTGCCCCCGTCCATCGGCCCCAC
AATTCACCTTCTCCAATGGCACCTCCTAACAGTTCCCTCGTGGAGAATTCAGAGTCACTG
ATGCTGACAAAAATG

InterProScan

Pfam
COE_DBD (IPR032200) - T[1-201] 1.9E-128
Gene3D
COE_DBD_sf (IPR038173) - T[1-200] 1.1E-125
PANTHER
Transcription_factor_COE (IPR003523) - T[1-532] 5.6E-250
ProSitePatterns
Transcription_factor_COE_CS (IPR018350) - T[115-124] .
Gene3D
Ig-like_fold (IPR013783) - T[201-301] 5.1E-33
SMART
IPT_dom (IPR002909) - T[217-301] 1.1E-7
Pfam
IPT_dom (IPR002909) - T[218-300] 1.1E-11
SUPERFAMILY
Ig_E-set (IPR014756) - T[218-301] 3.64E-19
Pfam
COE_HLH (IPR032201) - T[303-346] 2.5E-28
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[305-350] 1.6E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COE3_HUMAN 65.985 % 682 0
COE1_HUMAN 66.041 % 676 0
COE2_HUMAN 64.516 % 649 0





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