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TRANSCRIPT CARD

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  1. EST 'AV986235' > 
  2. Transcript 'Cisavi.CG.ENS81.R58....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R58.2239564-2256869.16752.t

Possible name(s)

GABBR1

Gene model

Cisavi.CG.ENS81.R58.2239564-2256869

Location

R58 [2,239,563 / 2,256,860]

Sequences

Amino acid sequence

Length: 675

>Cisavi.CG.ENS81.R58.2239564-2256869.16752.p
TQLCTTGGIFPMSGGWSGGQACYPAAKMAVDDVNSRDDILPGYKINLVKKDSKCDAGLGT
RKFYDLLQDQRIFTLLTGCSSVSTPIAESAYLWNVNVLAYGASSPALSNRSRFPSFFRTH
PSANLQNPTRIKFFQMFDWKRIGIISQGTEVFESTAKDLLARLHDENMEVVQQSFHADPK
VAVQNLKKSDVRIIVGLFYEGAARKVMCEAFKEKLFGEKYVWFLIGWYKHGWYTIKEKGV
DCNEEEMTRSVEGHFTTEILMLNPTNDTTVSGMNTAEFLTRLSNSTQDIHLKGGYEEAPL
AYDAIWAVALALNSTITRLKTSELNRNNGLILNDMYRSLNASSFTGISGTVGFDSDGSRM
AWTKVERMENGTYKEILIYHTEKKIMKKINKINWKQPPKDRTMIVHRSLKLSMSAFVAGG
SMAAACGLFCVACLIFTWKERENKLVICPGSSLNCVSLFGCIILLAAIFLYGLDVFGGTI
CEMRAWTLSLGFTIAFSPLFAKLWTVNDLRQKMLFDGTSSRKKKKDVKTMVVMVAPLLLD
LIVLVTWSCIDRLAQSKSKLAPYVSGEGEVIVQPELKMCGSTHFHIWIGVIFAYKSIQLL
LGSFLAYESRSKIESNSDHQTVAVAVYNITVLSLLCAPILMILGEEPNVSFLFLAVPIIV
CISASIAIIFIPKVL

Nucleotide sequence

Length: 2,025

>Cisavi.CG.ENS81.R58.2239564-2256869.16752.t
ACCCAGTTGTGTACTACAGGTGGGATATTCCCGATGTCAGGAGGGTGGTCAGGCGGCCAG
GCTTGCTACCCTGCTGCAAAGATGGCGGTCGATGACGTGAACAGCAGAGATGATATTCTT
CCTGGCTACAAAATCAACCTTGTCAAAAAAGACAGCAAGTGCGACGCAGGCCTCGGAACT
CGTAAATTTTACGACCTTCTGCAAGACCAGCGGATATTCACACTGCTCACAGGCTGTAGC
AGCGTGTCTACTCCAATTGCTGAGTCAGCGTATTTATGGAACGTGAATGTACTGGCTTAT
GGCGCGAGTTCGCCTGCTTTATCGAACAGGAGTCGATTTCCATCATTCTTCCGAACCCAT
CCATCGGCAAACCTTCAGAATCCAACTCGAATCAAATTCTTTCAAATGTTCGACTGGAAA
CGAATCGGAATTATAAGTCAGGGGACCGAAGTTTTCGAGTCGACTGCTAAGGACCTGCTT
GCACGCCTGCACGATGAAAATATGGAAGTTGTGCAGCAGTCGTTCCATGCAGATCCAAAA
GTCGCTGTTCAGAACTTGAAGAAATCTGATGTCCGGATAATAGTTGGTCTTTTCTACGAA
GGTGCAGCCAGGAAAGTCATGTGTGAGGCGTTTAAGGAGAAATTATTCGGAGAAAAATAT
GTTTGGTTCCTGATTGGTTGGTACAAACATGGGTGGTACACCATAAAAGAAAAGGGTGTG
GATTGTAATGAAGAGGAAATGACACGGTCAGTTGAAGGTCACTTCACAACCGAGATCTTA
ATGCTGAATCCAACCAATGATACAACTGTGTCAGGCATGAACACTGCAGAGTTTCTGACG
AGATTATCAAACTCCACCCAAGATATCCACTTAAAGGGAGGTTACGAAGAAGCTCCACTC
GCATACGACGCTATATGGGCAGTGGCTCTTGCGCTCAACAGCACCATCACGAGGCTGAAA
ACTTCAGAGCTTAATCGCAACAATGGACTTATACTTAATGACATGTACCGGTCACTTAAC
GCATCATCCTTCACTGGGATATCAGGAACCGTCGGGTTTGACTCCGACGGATCCAGGATG
GCGTGGACCAAGGTCGAACGAATGGAAAACGGGACGTACAAGGAGATACTGATCTACCAT
ACGGAGAAGAAAATCATGAAAAAGATAAATAAGATAAATTGGAAACAACCTCCGAAAGAC
CGAACAATGATCGTCCACCGGTCGTTAAAGCTATCCATGTCGGCTTTTGTGGCGGGTGGC
TCCATGGCTGCGGCATGTGGCTTGTTCTGCGTGGCGTGTCTTATCTTCACATGGAAAGAA
AGGGAAAACAAGTTGGTAATATGCCCTGGTTCATCGCTGAATTGTGTCAGTCTTTTCGGG
TGTATTATTTTACTTGCTGCAATATTTCTCTACGGTCTTGACGTCTTCGGTGGCACGATT
TGCGAGATGCGAGCGTGGACACTTTCTCTCGGCTTCACGATCGCTTTCTCCCCTCTCTTC
GCGAAGTTATGGACGGTGAACGATCTTCGTCAGAAGATGTTGTTTGATGGTACAAGCTCG
AGGAAGAAGAAGAAAGACGTTAAAACAATGGTTGTCATGGTAGCACCTCTTCTATTGGAT
CTCATTGTTCTTGTCACATGGTCTTGTATCGATCGGCTTGCACAATCAAAATCAAAGCTC
GCTCCATATGTAAGTGGTGAAGGTGAAGTGATCGTCCAACCTGAATTGAAGATGTGTGGT
TCAACGCATTTCCATATATGGATCGGTGTCATTTTTGCTTACAAGTCGATACAGCTTCTA
CTGGGTTCCTTTCTCGCGTATGAAAGTCGAAGCAAAATTGAGAGCAACAGCGACCATCAA
ACAGTAGCTGTGGCAGTGTACAATATAACTGTCCTCAGTCTTCTATGTGCGCCGATACTG
ATGATTCTTGGAGAAGAACCAAATGTTTCATTTCTGTTCCTGGCTGTCCCAATCATAGTG
TGTATATCCGCAAGCATCGCGATTATTTTCATTCCAAAGGTACTA

InterProScan

PANTHER
GPCR3_GABA-B (IPR002455) - T[5-674] 3.4E-216
SUPERFAMILY
Peripla_BP_I (IPR028082) - T[7-395] 2.49E-68
Pfam
ANF_lig-bd_rcpt (IPR001828) - T[22-368] 3.7E-55
Pfam
GPCR_3_C (IPR017978) - T[428-674] 8.6E-40
ProSiteProfiles
GPCR_3_C (IPR017978) - T[479-675] 16.848

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GABR2_HUMAN 29.37 % 353 5.0E-110
GABR1_HUMAN 43.294 % 574 0