- Clone 'cima823695' >
- EST 'BW068966' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R58....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R58.3067831-3077101.17628.t
Possible name(s)
DES; GFAP; VIM
Gene model
Location
R58 [3,067,867 / 3,076,844]
Amino acid sequence
Length: 531
>Cisavi.CG.ENS81.R58.3067831-3077101.17628.p
MSQRSRSTTQERSSSYKRHFGEGPGRFTYSAKAPGRSQSASRSYRYSSSSTGGAMGGGMG
GAMGGGMGGGMGGAMGSGMGGGMGGGMGGGMGGAMGGERIRMTRVNPVSSGITMRDINLM
SDAMGPEFEKMRINEKEELQVLNTRFAGYIQKVRALEQANKILEVQVEQLSAAQPGRVAD
MYEDELARLRREVDQISKEKANIQLQMENAALEANNWKDKYEEEAISKRELEDDLNSMRK
DCDDATLVRLDLERRLETLQEEIEFLKRTHDQEVAELMEQIRKTEIKIEMAPGPDLEELV
EDMRKQYEMLAAKNRADSEQWYTEKVSGLQSQAAKNDELVRGVRTELSEYRKSVQTLNME
IDSLRGTNDSLQRALGELEDRYNRDTSDYQETIMNLQAECDDLKTQMAQHLRQYQELMDV
KMALDIEIATYRKLLEGEETRLADKLRSSAGGHSRYVTSTTRSGYASGRGGEGAGYVSGR
GGDLSDDVETVTTKKVVVKTIETKDGKVVISQTEDVREQSSGDHDEAHPTL
Nucleotide sequence
Length: 1,651
>Cisavi.CG.ENS81.R58.3067831-3077101.17628.t
ATGTCGCAAAGGAGCAGATCAACAACTCAAGAGCGAAGCTCAAGCTACAAACGCCATTTT
GGCGAAGGGCCCGGCCGCTTTACATATTCAGCTAAGGCTCCCGGTCGATCTCAGTCCGCC
TCTCGATCGTACAGGTATTCCAGCAGTTCTACCGGAGGCGCCATGGGCGGTGGTATGGGT
GGCGCCATGGGTGGCGGCATGGGTGGTGGCATGGGTGGCGCCATGGGTAGCGGCATGGGC
GGTGGTATGGGTGGCGGCATGGGTGGTGGCATGGGTGGTGCCATGGGCGGTGAGCGTATC
CGAATGACCCGTGTAAACCCAGTCAGTAGCGGGATCACCATGAGAGACATCAACTTGATG
AGCGACGCCATGGGCCCAGAATTCGAAAAGATGAGAATAAACGAAAAAGAAGAACTGCAA
GTTCTCAACACCCGCTTTGCAGGATACATTCAAAAGGTCCGTGCCTTGGAGCAAGCGAAC
AAAATCTTGGAGGTTCAAGTCGAACAACTAAGCGCGGCTCAACCTGGTCGGGTTGCAGAT
ATGTATGAAGACGAGTTGGCAAGACTTCGTCGTGAAGTGGACCAGATTAGCAAGGAAAAG
GCGAACATCCAGCTTCAGATGGAAAATGCCGCACTAGAGGCAAACAACTGGAAGGATAAG
TATGAAGAGGAGGCGATAAGCAAACGTGAACTGGAGGACGACCTGAACTCGATGAGAAAA
GATTGCGATGATGCAACTCTCGTCCGACTCGACCTTGAACGGAGGTTGGAAACTCTCCAA
GAAGAAATCGAGTTCCTCAAGCGAACGCACGACCAGGAGGTTGCAGAGCTTATGGAGCAA
ATCAGGAAAACCGAGATCAAAATTGAGATGGCTCCCGGACCCGATCTGGAGGAACTCGTA
GAAGACATGAGGAAACAATATGAGATGTTGGCTGCTAAGAACAGAGCCGATTCCGAGCAG
TGGTACACCGAAAAGGTCAGCGGTCTCCAAAGCCAAGCCGCCAAGAACGACGAACTGGTA
CGAGGCGTGCGAACTGAACTGAGCGAATACAGGAAGAGCGTTCAAACGCTCAACATGGAG
ATCGATTCTCTCCGTGGAACCAACGACTCACTTCAACGTGCGCTTGGAGAACTCGAAGAC
AGATACAACAGAGACACTTCTGACTACCAAGAAACCATCATGAACCTTCAGGCCGAATGT
GATGACTTGAAGACCCAGATGGCCCAACATCTCCGTCAGTACCAGGAACTAATGGACGTG
AAGATGGCACTCGACATCGAAATCGCAACTTACAGAAAACTCTTGGAGGGCGAGGAAACG
AGGCTTGCAGACAAGCTTCGCTCGTCAGCTGGGGGACATTCTAGATACGTCACAAGCACA
ACTAGATCGGGATACGCATCTGGACGGGGAGGTGAAGGTGCCGGTTACGTATCTGGACGA
GGTGGTGACCTTAGTGATGACGTAGAGACAGTAACAACAAAGAAAGTGGTCGTTAAGACG
ATCGAAACGAAAGATGGAAAGGTGGTGATCAGCCAAACGGAAGACGTCCGTGAGCAATCT
TCCGGCGATCACGACGAAGCTCACCCAACTTTGTGAGCACTATGACATCACAAGGACAAT
TCTTTTAAAATGTGTTGAACAATTTGTAGAT
| PANTHER |
IF (IPR001664) - T[66-527] 1.3E-151 |
| Pfam |
IF (IPR001664) - T[134-441] 2.2E-99 |
| SMART |
IF (IPR001664) - T[134-441] 1.2E-133 |
| PRINTS |
Keratin_I (IPR002957) - T[210-223] 7.2E-17 - T[231-254] 7.2E-17 - T[284-304] 7.2E-17 - T[356-371] 7.2E-17 - T[382-408] 7.2E-17 |
| ProSitePatterns |
Intermediate_filament_CS (IPR018039) - T[428-436] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VIME_HUMAN | 38.664 % | 328 | 3.74E-107 |
| GFAP_HUMAN | 37.931 % | 293 | 2.27E-94 |
| DESM_HUMAN | 40.535 % | 285 | 1.2E-90 |