- Transcript 'KH2012:KH.L106.19.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Clone 'cien133475' >
- Clone 'cign071j11' >
- Transcript 'Cisavi.CG.ENS81.R58....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R58.3244828-3248142.17721.t
Possible name(s)
NHP2; RPL7A; SNU13
Gene model
Location
R58 [3,244,827 / 3,248,142]
Amino acid sequence
Length: 127
>Cisavi.CG.ENS81.R58.3244828-3248142.17721.p
MSDEVNSKAYPLADAELTKTILDLIQQAANYKQLRKGANEATKTLNRGLSEMIVLSADAE
PLEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVISASITISEGSQLKPQIDSLRT
RVEKLLV
Nucleotide sequence
Length: 600
>Cisavi.CG.ENS81.R58.3244828-3248142.17721.t
TTTAACATTGATTTCTTTTGTTTTACAGATCTACATCGTTTAGATCTTACTTTATATGTG
AATTAAACCGAGCGAGACCCTCAGTGAAGCAAGGATCCCCTTAACTTTGGTGAGCAGAGA
GGAAAACTTACAAAACAAAATGAGTGATGAAGTAAACAGCAAGGCTTACCCACTTGCGGA
TGCAGAACTGACCAAAACCATCTTGGACCTCATTCAGCAAGCTGCAAACTACAAACAACT
TAGAAAAGGAGCCAATGAGGCCACAAAGACTTTGAATCGTGGATTGTCGGAGATGATTGT
TCTGTCTGCCGACGCTGAACCGCTGGAGATTCTACTGCATCTCCCACTACTATGCGAGGA
CAAGAATGTGCCGTATGTGTTTGTGCGCTCAAAGCAAGCGTTGGGACGAGCATGTGGCGT
GTCGCGGCCTGTCATTTCCGCATCGATCACCATAAGCGAGGGCTCCCAACTCAAACCGCA
GATTGATTCTCTCCGAACCAGAGTTGAAAAGTTGCTTGTCTGAGTTTCATGGAGTACAAA
CTTTTTTCACTGCCCACATCGTGTAGAAATTGTAAAATACACTGATTAAATTTTCAGAGA
| Gene3D |
L30e-like (IPR029064) - T[1-127] 7.1E-50 |
| SUPERFAMILY |
L30e-like (IPR029064) - T[5-124] 2.17E-34 |
| PRINTS |
H/ACA_rnp_Nhp2_euk (IPR002415) - T[7-20] 4.6E-26 - T[20-35] 4.6E-26 - T[37-47] 4.6E-26 - T[81-93] 4.6E-26 |
| Pfam |
Ribosomal_L7Ae/L30e/S12e/Gad45 (IPR004038) - T[21-110] 3.5E-25 |
| PRINTS |
Ribosomal_L7Ae/L8/Nhp2 (IPR018492) - T[34-48] 1.7E-20 - T[53-66] 1.7E-20 - T[69-79] 1.7E-20 - T[79-93] 1.7E-20 |
| ProSitePatterns |
Ribosomal_L7Ae_CS (IPR004037) - T[72-89] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NHP2_HUMAN | 40 % | 90.1 | 4.58E-24 |
| NH2L1_HUMAN | 79.839 % | 201 | 2.67E-68 |