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TRANSCRIPT CARD

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  1. Clone 'ciem827k23' > 
  2. Clone 'cien67130' > 
  3. Transcript 'Cisavi.CG.ENS81.R5.9...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R5.906116-906924.01126.t

Possible name(s)

SNF8

Gene model

Cisavi.CG.ENS81.R5.906116-906924

Location

R5 [906,115 / 906,924]

Sequences

Amino acid sequence

Length: 248

>Cisavi.CG.ENS81.R5.906116-906924.01126.p
MRRRGVGASAITKKKLETSRYKEHGNELAMIQLDQLSKQLETFHSHLEKFAANHKQEIRK
DPQFRRQFQQMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQLVEVCITTRPQNGGIMP
IKELHQKLLKTRGKYAQDISLDDIKTALSKLKLLGTGFTLLGTGSKQIVKSVPGELNMDH
SAVLEVAQKYNGKVSNSDIEAMYNWQTERIQHVMEHLVREGMAWIDTQTPNKETWFWFPA
FFNVKNNN

Nucleotide sequence

Length: 809

>Cisavi.CG.ENS81.R5.906116-906924.01126.t
AACTTTTTAAGTAAATTGCAATGCGGCGAAGAGGGGTTGGAGCAAGTGCTATTACTAAGA
AGAAGCTGGAAACTTCCAGGTATAAGGAACATGGAAACGAACTTGCTATGATACAACTTG
ATCAGCTGAGTAAACAACTCGAGACTTTTCATTCACATCTAGAGAAATTTGCTGCCAACC
ATAAGCAAGAAATAAGAAAAGATCCTCAATTTCGTCGTCAGTTCCAACAGATGTGCGCTA
CTATTGGCGTTGATCCATTGGCCTCTGGGAAAGGATTCTGGTCAGAAATGCTGGGAGTAG
GTGACTTTTATTATGAGCTTGGGGTGCAGTTAGTTGAAGTATGCATTACAACCAGGCCGC
AAAATGGTGGAATCATGCCAATTAAAGAGCTGCATCAAAAACTTTTGAAAACCAGAGGAA
AATATGCACAAGATATTTCATTAGATGACATTAAAACCGCGTTATCGAAACTAAAACTGC
TCGGTACAGGTTTCACTCTACTTGGCACAGGTTCAAAACAAATCGTAAAGTCAGTACCTG
GTGAACTTAATATGGATCATTCTGCTGTTTTAGAAGTTGCTCAAAAGTATAATGGTAAAG
TGTCTAATAGTGATATTGAAGCAATGTATAACTGGCAGACGGAGCGTATACAACATGTTA
TGGAACATTTGGTCAGAGAAGGAATGGCTTGGATTGATACACAAACACCAAATAAGGAAA
CCTGGTTTTGGTTTCCAGCATTTTTTAATGTTAAGAACAATAATTAAGTCTTGTTTTACT
TTTCTATAAATATGATGTTGTCTTTTAAT

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[1-244] 3.8E-99
PIRSF
ESCRT-2_cplx_Snf8 (IPR016689) - T[2-248] 2.4E-93
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[24-175] 7.48E-49 - T[176-242] 1.96E-14
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[92-172] 5.1E-29 - T[173-248] 9.2E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 60.494 % 318 1.87E-110