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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Clone 'cima879167' > 
  3. Transcript 'KH2012:KH.C4.385.v1....' > 
  4. Transcript 'Cisavi.CG.ENS81.R5.9...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R5.951713-966439.01173.t

Possible name(s)

EDEM1; EDEM2; EDEM3

Gene model

Cisavi.CG.ENS81.R5.951713-966439

Location

R5 [951,712 / 966,439]

Sequences

Amino acid sequence

Length: 218

>Cisavi.CG.ENS81.R5.951713-966439.01173.p
MMINTWVDSLQAFFPGLLVLNGDIEEAICCHAFYYAIWKRYDALPERYNWRLKEPDVRFY
PLRPEFIESTYLLYRATKNPFYLHIGREILDSLEKHAKTECGYASLHNVLDKSQEDRMES
FFLSETCKYLYLLFDFENPLHQNKGMQTVFTTEGHLLPVNRNKPWEREFDFCFDGPSLNK
VSNQSRRQCEYISMERRFSLPLHRDYLQQVHEMVGGVT

Nucleotide sequence

Length: 1,310

>Cisavi.CG.ENS81.R5.951713-966439.01173.t
GGCATGATGATCAACACTTGGGTGGATTCACTGCAAGCATTCTTTCCAGGATTGCTGGTT
CTAAACGGCGACATAGAGGAAGCTATCTGTTGCCATGCATTCTACTATGCAATATGGAAG
AGATATGATGCTCTACCGGAGCGATACAACTGGAGACTCAAAGAACCTGACGTTAGATTT
TACCCCCTCCGGCCTGAGTTTATAGAGAGTACTTATCTCCTATACAGGGCCACCAAAAAC
CCATTTTACCTCCATATTGGGCGTGAGATTCTAGATTCGCTTGAAAAGCACGCCAAGACC
GAATGTGGCTATGCTTCACTTCACAATGTACTTGATAAGTCACAAGAAGATCGGATGGAA
TCATTTTTTCTGAGCGAAACGTGCAAATATCTTTACCTGTTGTTTGACTTTGAAAACCCA
CTTCATCAGAACAAAGGAATGCAAACTGTGTTCACCACTGAAGGCCATCTATTACCAGTT
AATCGTAACAAACCTTGGGAAAGGGAGTTTGACTTTTGCTTTGATGGTCCATCTTTAAAT
AAAGTGTCGAACCAGTCCAGGCGACAATGTGAATACATTTCTATGGAGCGAAGGTTTTCG
CTTCCCCTGCACCGAGACTACCTCCAACAAGTACATGAAATGGTGGGAGGAGTCACGTGA
CAATCTGCGGGGACAAATGGCTACACATCAACTAACTACGAGCCTATATACCGCCCAATC
GATTTGCAACTCTTCCACCACCCTAAACGGACGCCCAAATCCACTTTGACCACTGCTCAA
GAATATTTCTCAAACCCCACTGTGGTAATGTACTGGTCCCTCGCCCTGGTTAGCCTTTTA
CAAGCTTGCTGGCAACTCGTGCAACATTTATACTGCAGATAGGCAAACAGACAAGCTGCC
ATACTAAAAATGTCACTATCCACAAATAATTGTCCTTTATGCCAAACTGTTAACTTAATG
CGTTATTTACTCATATGTGTAATAGGTGATTATCCATATAAGGCAAGTGGTGTAGTTGGT
ATAACTTTATAGATTTTTGTTGGTGACGTAGATTGGTGGCCCTTTGTCCCTGGAAATGTG
CAATGCCTTGTAAATACGCAAAATGTTTTCTTTTTTATCCATAATGAATCAAATTTTATT
TACTTTTTATTACTTCCATAGGTCTACGAACTAAGTGTGTAATACGTAAAAATTAATAAA
AAGTTTTATATTTGTTAAAAAGTTTTATTTAAGTGTTAAGTGGGTGAAAAAGTGCCTTAC
CGGTGTTGTTTTTACGTGCCTTATTGAAATACAACTTTCCTGAAAATTAA

InterProScan

Gene3D
6hp_glycosidase-like_sf (IPR012341) - T[1-170] 2.0E-57
Pfam
Glyco_hydro_47 (IPR001382) - T[3-158] 1.6E-43
SUPERFAMILY
Seven-hairpin_glycosidases (IPR036026) - T[3-159] 1.44E-53
PRINTS
Glyco_hydro_47 (IPR001382) - T[6-22] 5.2E-20 - T[61-85] 5.2E-20 - T[120-140] 5.2E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EDEM3_HUMAN 47.879 % 147 8.77E-41
EDEM2_HUMAN 48.201 % 131 1.33E-35
EDEM1_HUMAN 61.739 % 281 2.25E-91