- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Cisavi.CG.ENS81.R5.9...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R5.951713-966439.01175.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
R5 [958,809 / 966,404]
Amino acid sequence
Length: 543
>Cisavi.CG.ENS81.R5.951713-966439.01175.p
YGENYLHFPESKRLAAKEDARNMFYFGYDNYMKFAFPQDELNPIACCGRGPDILNPLNLN
INDVLGNFSLTLIDSLDTLAIMGNSTEFKYAVDVVLNQVNFDLNSTVQVFETNIRVLGSL
LSAHLIIEDDEQPFGNMRLPNYNGELLSLAHDLAVRLLPAFEHTSSGIPYPRVNLRYGIP
NSTVTHTATAGAGSLLLEFGTLSRLTGDPTFENLARRAMHELWSRKNSDTGLFGVAIDVV
SGKWMGKQSGVGAGLDSFLEYLLKAYVLFGEKNDLEMFDEAMQSIKDHLRRGRKHCNSGH
GDPPIYVNVDLSNGMMINTWVDSLQAFFPGLLVFFNHFHLIFPHKVLNGDIEEAICCHAF
YYAIWKRYDALPERYNWRLKEPDVRFYPLRPEFIESTYLLYRATKNPFYLHIGREILDSL
EKHAKTECGYASLHNVLDKSQEDRMESFFLSETCKYLYLLFDFENPLHQNKGMQTVFTTE
GHLLPVNRNKPWEREFDFCFDGPSLNKVSNQSRRQCEYISMERRFSLPLHRDYLQQVHEM
VGG
Nucleotide sequence
Length: 2,253
>Cisavi.CG.ENS81.R5.951713-966439.01175.t
TATGGAGAAAATTATTTACATTTTCCGGAATCAAAACGACTGGCAGCAAAAGAAGATGCC
CGTAATATGTTTTATTTTGGGTATGATAATTATATGAAATTTGCATTTCCACAAGATGAG
TTAAATCCAATAGCTTGCTGTGGAAGGGGCCCGGATATTTTAAATCCGTTAAACTTGAAC
ATAAATGATGTTCTGGGAAACTTTTCTCTGACACTCATCGATTCACTGGATACCCTTGCA
ATTATGGGCAACTCAACTGAGTTCAAATATGCCGTTGATGTCGTATTAAACCAAGTAAAT
TTCGATTTGAACTCAACAGTACAAGTTTTTGAAACAAATATTCGAGTTCTTGGATCATTG
TTGTCTGCTCATCTAATTATAGAAGATGATGAACAACCATTTGGAAACATGCGTCTTCCA
AATTACAATGGAGAACTTCTTTCTCTTGCCCATGATCTGGCTGTTCGGTTGCTGCCTGCC
TTTGAGCACACTAGTTCTGGAATCCCTTATCCCAGGGTAAACTTACGTTATGGCATTCCA
AACTCAACGGTCACGCACACGGCCACAGCAGGAGCTGGATCTCTGCTTCTTGAGTTCGGG
ACACTAAGTCGACTCACAGGCGATCCAACATTTGAAAACCTCGCACGACGAGCCATGCAT
GAACTCTGGTCGAGAAAAAATTCTGACACCGGTTTATTTGGAGTAGCGATTGACGTTGTC
AGTGGAAAATGGATGGGAAAACAAAGCGGTGTTGGAGCTGGTTTGGATTCTTTCCTTGAA
TATTTACTCAAGGCTTATGTTTTGTTTGGTGAAAAGAATGATCTCGAAATGTTTGATGAA
GCTATGCAAAGTATTAAAGACCATTTAAGAAGGGGACGGAAACATTGTAACAGTGGTCAT
GGGGACCCACCTATATATGTGAATGTGGACTTATCAAATGGCATGATGATCAACACTTGG
GTGGATTCACTGCAAGCATTCTTTCCAGGATTGCTGGTATTTTTTAATCACTTCCATCTG
ATATTTCCTCACAAGGTTCTAAACGGCGACATAGAGGAAGCTATCTGTTGCCATGCATTC
TACTATGCAATATGGAAGAGATATGATGCTCTACCGGAGCGATACAACTGGAGACTCAAA
GAACCTGACGTTAGATTTTACCCCCTCCGGCCTGAGTTTATAGAGAGTACTTATCTCCTA
TACAGGGCCACCAAAAACCCATTTTACCTCCATATTGGGCGTGAGATTCTAGATTCGCTT
GAAAAGCACGCCAAGACCGAATGTGGCTATGCTTCACTTCACAATGTACTTGATAAGTCA
CAAGAAGATCGGATGGAATCATTTTTTCTGAGCGAAACGTGCAAATATCTTTACCTGTTG
TTTGACTTTGAAAACCCACTTCATCAGAACAAAGGAATGCAAACTGTGTTCACCACTGAA
GGCCATCTATTACCAGTTAATCGTAACAAACCTTGGGAAAGGGAGTTTGACTTTTGCTTT
GATGGTCCATCTTTAAATAAAGTGTCGAACCAGTCCAGGCGACAATGTGAATACATTTCT
ATGGAGCGAAGGTTTTCGCTTCCCCTGCACCGAGACTACCTCCAACAAGTACATGAAATG
GTGGGAGGAGTCACGTGACAATCTGCGGGGACAAATGGCTACACATCAACTAACTACGAG
CCTATATACCGCCCAATCGATTTGCAACTCTTCCACCACCCTAAACGGACGCCCAAATCC
ACTTTGACCACTGCTCAAGAATATTTCTCAAACCCCACTGTGGTAATGTACTGGTCCCTC
GCCCTGGTTAGCCTTTTACAAGCTTGCTGGCAACTCGTGCAACATTTATACTGCAGATAG
GCAAACAGACAAGCTGCCATACTAAAAATGTCACTATCCACAAATAATTGTCCTTTATGC
CAAACTGTTAACTTAATGCGTTATTTACTCATATGTGTAATAGGTGATTATCCATATAAG
GCAAGTGGTGTAGTTGGTATAACTTTATAGATTTTTGTTGGTGACGTAGATTGGTGGCCC
TTTGTCCCTGGAAATGTGCAATGCCTTGTAAATACGCAAAATGTTTTCTTTTTTATCCAT
AATGAATCAAATTTTATTTACTTTTTATTACTTCCATAGGTCTACGAACTAAGTGTGTAA
TACGTAAAAATTAATAAAAAGTTTTATATTTGTTAAAAAGTTTTATTTAAGTGTTAAGTG
GGTGAAAAAGTGCCTTACCGGTGTTGTTTTTAC
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[7-497] 1.0E-153 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[14-489] 2.35E-142 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[23-485] 3.5E-122 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[23-43] 7.5E-58 - T[69-83] 7.5E-58 - T[106-124] 7.5E-58 - T[160-179] 7.5E-58 - T[252-269] 7.5E-58 - T[320-336] 7.5E-58 - T[388-412] 7.5E-58 - T[447-467] 7.5E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 44.654 % | 357 | 6.12E-113 |
| EDEM2_HUMAN | 42.14 % | 337 | 2.4E-109 |
| EDEM1_HUMAN | 62.795 % | 695 | 0 |