- Transcript 'Cisavi.CG.ENS81.R60....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R60.320392-337742.10307.t
Possible name(s)
LRP1; LRP6
Gene model
Location
R60 [320,391 / 326,171]
Amino acid sequence
Length: 272
>Cisavi.CG.ENS81.R60.320392-337742.10307.p
MIMCTKQRIVGLFVLSAVFLATVVKRTYGNNNGIFADCVDGPSVWYRGTHNFTNTGTACQ
RWDTNTPHTPRYVPVDGGEHNYCRNPDGDLRGTWCYTMNVSSRWEYCEIPKCPDDSLVIW
TNYDSKSQSSHLLSVQADPEIVKKETDTSGIFNVSVVVGSRETQTEFWAIASDYLRRKIF
FTDYRSEYVGVRFLNSNITVKYFKGMAHGIESMAFDWKTRNLYWTDSEFKWIMATDSSFR
YYSPVYRSGKREPPYGLAIVRRKMYFSTYKAF
Nucleotide sequence
Length: 847
>Cisavi.CG.ENS81.R60.320392-337742.10307.t
CCACTTAGGGCGTAGTTTTTAGCTTTTGAAATGATAATGTGCACGAAACAGCGAATAGTC
GGGTTGTTTGTGCTATCTGCTGTGTTCCTTGCAACCGTGGTTAAGAGGACCTACGGAAAT
AATAACGGCATTTTTGCAGATTGCGTGGACGGACCAAGTGTTTGGTACAGAGGAACTCAT
AATTTCACGAACACTGGTACAGCGTGTCAACGATGGGACACCAATACTCCACACACGCCA
AGATATGTACCCGTGGATGGGGGGGAACATAACTACTGCAGGAACCCCGACGGTGATTTA
CGAGGCACATGGTGTTATACTATGAACGTATCTTCAAGATGGGAATATTGCGAAATCCCC
AAATGCCCTGATGACTCTCTGGTTATCTGGACAAACTACGACTCTAAAAGTCAGTCGTCC
CACCTTCTCTCGGTGCAAGCAGATCCGGAAATTGTGAAGAAAGAAACGGACACTTCCGGT
ATTTTCAACGTCTCTGTGGTTGTCGGATCCCGAGAGACACAGACTGAATTCTGGGCAATA
GCCAGCGACTATCTTCGGAGAAAAATCTTTTTTACAGACTATAGGTCGGAATATGTCGGC
GTTCGGTTCCTCAATTCAAATATTACTGTCAAGTACTTCAAAGGGATGGCACATGGTATT
GAGAGCATGGCTTTCGATTGGAAGACCAGGAATCTATACTGGACTGACTCCGAGTTTAAA
TGGATCATGGCGACCGATAGTTCTTTTAGATACTACTCGCCGGTTTACAGAAGCGGAAAA
AGGGAACCACCGTATGGTCTGGCAATTGTGCGCAGGAAAATGTATTTCTCGACCTACAAA
GCATTTG
| Gene3D |
Kringle_sf (IPR038178) - T[13-121] 5.1E-29 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[35-118] 4.59E-29 |
| SMART |
Kringle (IPR000001) - T[36-114] 3.4E-26 |
| ProSiteProfiles |
Kringle (IPR000001) - T[37-112] 22.469 |
| Pfam |
Kringle (IPR000001) - T[38-112] 2.6E-19 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[82-95] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[131-271] 2.7E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PLMN_HUMAN | 40.367 % | 87 | 2.8E-19 |
| APOA_HUMAN | 44.828 % | 87 | 3.96E-19 |
| ROR2_HUMAN | 41.573 % | 83.6 | 5.09E-18 |