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  1. Transcript 'Cisavi.CG.ENS81.R60....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R60.320392-337742.10308.t

Possible name(s)

LRP1; LRP6

Gene model

Cisavi.CG.ENS81.R60.320392-337742

Location

R60 [322,988 / 328,791]

Sequences

Amino acid sequence

Length: 426

>Cisavi.CG.ENS81.R60.320392-337742.10308.p
MNVSSRWEYCEIPKCPDDSLVIWTNYDSKSQSSHLLSVQADPEIVKKETDTSGIFNVSVV
VGSRETQTEFWAIASDYLRRKIFFTDYRSEYVGVRFLNSNITVKYFKGMAHGIESMAFDW
KTRNLYWTDSEFKWIMATDSSFRYYSPVYRSGKREPPYGLAIHSKLRKMYFSTYKAFGSK
IMVSDLAGKNATTLFQFPLVFDVTGLTIDYTNDRLYWTDFTGYGAMVMSSKLDGTNKTQI
YYRQGSIFWGVAAYLDYLYVTDVHARYSHSADKYYAVWVVVKRTKQAFRYTLVGKPRGIA
VMSNNEERSFDEVSRYGECTESPQCDHICLPRINATRECACSLGYHKVGDVGCSSVIARD
EAVFISDSGQGKIFQIELNVMESEQPSNYNIVPTGHRNSIASVSVDMNSRQLYWSEKRTK
KIKRAL

Nucleotide sequence

Length: 1,449

>Cisavi.CG.ENS81.R60.320392-337742.10308.t
GGACCAAGTGTTTGGTACAGAGGAACTCATAATTTCACGAACACTGGTACAGCGTGTCAA
CGATGGGACACCAATACTCCACACACGCCAAGATATGTACCCGTGGATGGGGGGGAACAT
AACTACTGCAGGAACCCCGACGGTGATTTACGAGGCACATGGTGTTATACTATGAACGTA
TCTTCAAGATGGGAATATTGCGAAATCCCCAAATGCCCTGATGACTCTCTGGTTATCTGG
ACAAACTACGACTCTAAAAGTCAGTCGTCCCACCTTCTCTCGGTGCAAGCAGATCCGGAA
ATTGTGAAGAAAGAAACGGACACTTCCGGTATTTTCAACGTCTCTGTGGTTGTCGGATCC
CGAGAGACACAGACTGAATTCTGGGCAATAGCCAGCGACTATCTTCGGAGAAAAATCTTT
TTTACAGACTATAGGTCGGAATATGTCGGCGTTCGGTTCCTCAATTCAAATATTACTGTC
AAGTACTTCAAAGGGATGGCACATGGTATTGAGAGCATGGCTTTCGATTGGAAGACCAGG
AATCTATACTGGACTGACTCCGAGTTTAAATGGATCATGGCGACCGATAGTTCTTTTAGA
TACTACTCGCCGGTTTACAGAAGCGGAAAAAGGGAACCACCGTATGGTCTGGCAATACAC
TCAAAACTAAGGAAAATGTATTTCTCGACCTACAAAGCATTTGGATCCAAAATCATGGTC
AGTGATTTAGCTGGCAAAAATGCAACCACGTTATTCCAATTCCCACTTGTGTTTGATGTT
ACTGGACTCACTATCGATTACACGAACGACAGGTTGTACTGGACCGATTTCACGGGATAT
GGAGCAATGGTTATGAGCAGTAAATTGGACGGAACAAACAAAACCCAAATTTATTACAGA
CAAGGGTCAATTTTCTGGGGCGTGGCGGCTTATTTAGACTACTTGTATGTCACAGACGTG
CACGCCCGGTACAGTCACAGCGCTGATAAATACTATGCGGTGTGGGTGGTAGTCAAACGC
ACCAAACAAGCGTTTAGATATACTCTGGTTGGAAAACCACGAGGAATTGCAGTTATGAGT
AACAACGAAGAGAGATCATTCGACGAAGTCTCTCGGTATGGGGAATGTACCGAAAGCCCC
CAATGCGACCATATCTGCTTGCCCAGGATCAACGCAACTAGAGAATGCGCGTGCTCACTC
GGATATCATAAAGTGGGAGACGTTGGTTGTAGTTCAGTCATAGCTCGAGACGAAGCAGTC
TTTATATCTGATTCGGGGCAAGGAAAGATATTCCAGATTGAGCTTAATGTAATGGAGAGC
GAGCAACCAAGCAATTATAACATCGTACCAACAGGGCACAGGAATTCCATTGCATCTGTG
TCAGTGGATATGAATTCCCGGCAGCTGTACTGGTCTGAAAAAAGAACGAAAAAAATAAAA
AGAGCTCTC

InterProScan

Gene3D
6-blade_b-propeller_TolB-like (IPR011042) - T[24-354] 2.8E-47 - T[355-426] 2.6E-5
SMART
LDLR_classB_rpt (IPR000033) - T[103-143] 1.8 - T[147-191] 5.2 - T[192-237] 5.2E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRP4_HUMAN 25.138 % 85.9 1.01E-17