- Transcript 'Cisavi.CG.ENS81.R60....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R60.320392-337742.10309.t
Possible name(s)
LRP1; LRP6
Gene model
Location
R60 [328,280 / 334,314]
Amino acid sequence
Length: 482
>Cisavi.CG.ENS81.R60.320392-337742.10309.p
MESEQPSNYNIVPTGHRNSIASVSVDMNSRQLYWSEKRTKKIKRALFDGSRINVLSTGKH
ANSMTIDPQTGNVFLVDDEHDTIMVMSHNGNHIKTIMQPSPSLNGTDIRMITQDVKNRYL
YWTDTRGEEGRGQVWRMRLDGADRELVFDNLNWPHAITIDHTRDSLFFCEAKDAMIYEMP
LSRLVGTINSTSSQSIPLQHDLSGHLPRLRFYILDIKVHDNFLYFVDGKSSKVERFNLTE
GVASVTRFGPPEFFRVTNIAVLSTSYVADFIARIPSPCSSNSMTCGHLCVATSDSRRKCL
CADGYRLVYGTACIFDTSLVPNIPPSYGNTCQEDASLWVDSCSDSTIFNWTAPVWTDDKT
SSAALTKVGPSETSRRLTIGDHVITYTATDAGGLSTTCRIRVTVRTALCPPPPALHNQLS
ATPTLCGNQFGSTYVIFCKDPTKVIELGVNRRGENITNRCQGEEGWLLDDLHQVTCLAIS
PP
Nucleotide sequence
Length: 1,467
>Cisavi.CG.ENS81.R60.320392-337742.10309.t
TCCAGATTGAGCTTAATGTAATGGAGAGCGAGCAACCAAGCAATTATAACATCGTACCAA
CAGGGCACAGGAATTCCATTGCATCTGTGTCAGTGGATATGAATTCCCGGCAGCTGTACT
GGTCTGAAAAAAGAACGAAAAAAATAAAAAGAGCTCTCTTTGACGGTTCGCGAATTAATG
TCCTTTCAACTGGAAAACACGCCAACAGCATGACCATAGACCCGCAGACTGGAAACGTAT
TCTTAGTCGACGACGAACACGATACTATTATGGTAATGAGCCACAATGGAAATCATATAA
AAACAATCATGCAGCCCAGTCCCTCGTTGAACGGAACCGACATTAGAATGATAACACAAG
ATGTCAAAAACAGGTACTTGTACTGGACCGACACACGAGGCGAGGAAGGCCGTGGCCAAG
TGTGGAGAATGAGGCTTGATGGAGCAGACAGGGAACTGGTATTCGATAATCTGAACTGGC
CGCATGCTATTACGATCGATCATACAAGAGACAGCTTATTCTTTTGCGAAGCGAAGGATG
CAATGATATACGAAATGCCATTGTCCAGGCTCGTTGGTACAATCAATTCAACGTCATCGC
AGAGTATTCCACTTCAGCATGATCTTTCGGGTCACTTACCGAGACTTCGATTTTACATTC
TTGACATCAAGGTTCATGACAACTTTCTTTACTTTGTGGATGGCAAGTCTAGTAAAGTGG
AAAGGTTTAATCTGACGGAGGGTGTCGCATCAGTTACGCGTTTCGGGCCACCCGAGTTCT
TTCGTGTGACGAATATAGCTGTGTTGAGTACTTCGTACGTGGCAGATTTTATTGCTCGCA
TCCCATCGCCGTGTAGCTCCAATTCAATGACATGCGGCCACCTGTGTGTCGCTACGTCGG
ATAGCAGACGGAAATGCCTTTGTGCTGACGGATACCGACTGGTCTACGGAACGGCGTGCA
TTTTCGACACTTCATTAGTTCCAAACATCCCACCAAGCTATGGTAACACTTGTCAAGAAG
ACGCCTCTCTGTGGGTGGACAGTTGTAGCGATTCGACAATATTTAACTGGACAGCACCAG
TATGGACGGATGATAAAACTAGCTCGGCAGCGTTAACCAAAGTAGGACCCAGCGAAACCA
GCAGAAGACTCACAATTGGCGACCATGTTATCACGTACACTGCGACCGATGCCGGTGGTC
TATCAACTACGTGCAGAATACGGGTAACCGTGCGAACCGCGCTCTGTCCACCGCCCCCAG
CGTTGCACAACCAACTTTCTGCCACGCCTACGTTATGCGGCAACCAATTCGGCTCGACCT
ACGTCATATTTTGCAAAGACCCAACTAAGGTTATAGAGCTGGGAGTAAACAGAAGAGGAG
AAAACATCACAAACCGCTGCCAGGGCGAAGAAGGATGGCTGCTTGATGACTTGCATCAAG
TAACCTGCTTGGCTATTTCTCCTCCAG
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[1-315] 5.8E-50 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[10-52] 0.03 - T[53-93] 1.2 - T[94-144] 0.24 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[30-70] 9.414 - T[71-98] 4.424 - T[118-163] 12.036 - T[221-238] 4.517 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[320-406] 16.151 |
| Pfam |
HYR_dom (IPR003410) - T[344-404] 1.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 24.756 % | 93.6 | 6.67E-20 |