Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R62.370785-373596.03161.t

Possible name(s)

CAMK1; PINK1; TBCK

Gene model

Cisavi.CG.ENS81.R62.370785-373596

Location

R62 [370,784 / 373,596]

Sequences

Amino acid sequence

Length: 303

>Cisavi.CG.ENS81.R62.370785-373596.03161.p
MVMKGVLQASTQQISNCNLAGVIGIDSVFTSLGMHLRQFICLVTQRYEMSLKDYLRRYKL
DMNTCMVVLAQIFEVVAYLEDQSVVHRAISSENFFVESTNNNSYPHLLLGHFDNAHSTGN
KNGLLIPFQHETLDPRLSDLACQAPEVSRAKPGKRALIDYRKADAWSAGILAYEVLTGSN
QFKEHKIDSRTFMEKEIPSLHLIPMPHVLKMIARLLLSVNPSKRLSANEAADMLHFEIFA
ESPLVSVTNQIPELCSWLTAHSAEMLARQQQDQVLVDLCRCFFRRIEPTNLFRSYKLWLL
IKG

Nucleotide sequence

Length: 1,180

>Cisavi.CG.ENS81.R62.370785-373596.03161.t
CCATCCAAACATCATGGTTATGAAAGGAGTTTTGCAAGCATCTACACAGCAGATCAGTAA
TTGCAATCTAGCAGGGGTGATCGGCATTGATTCAGTGTTTACATCACTGGGGATGCACCT
CAGACAATTCATTTGTTTGGTAACCCAGAGGTATGAAATGTCACTCAAGGATTATTTGCG
GCGGTACAAATTGGACATGAATACTTGCATGGTGGTTCTTGCTCAAATATTTGAGGTGGT
TGCGTATCTAGAAGACCAATCAGTGGTTCATCGGGCCATTTCAAGTGAAAATTTCTTTGT
TGAATCTACGAACAATAACAGCTATCCACACTTGCTTCTTGGACATTTTGACAATGCCCA
CAGCACAGGGAACAAGAATGGTTTGTTGATCCCTTTTCAACATGAGACACTTGACCCGAG
ATTGTCTGATTTGGCGTGCCAGGCTCCAGAGGTATCCAGAGCAAAACCAGGTAAAAGAGC
ATTGATTGATTATCGTAAAGCTGATGCTTGGTCTGCTGGGATCCTGGCATACGAAGTATT
AACCGGTTCCAACCAGTTTAAAGAACACAAGATAGATTCACGAACTTTTATGGAAAAGGA
AATTCCCAGTTTGCATTTAATCCCCATGCCCCATGTTTTAAAAATGATAGCCAGGCTGTT
GTTGTCCGTGAACCCAAGTAAGCGACTGTCTGCAAATGAGGCAGCTGATATGTTGCACTT
TGAAATTTTTGCTGAGTCACCACTGGTGTCCGTGACTAATCAGATTCCTGAGCTCTGTTC
ATGGTTGACTGCACACAGTGCTGAGATGTTGGCAAGGCAACAGCAAGACCAAGTTCTCGT
AGATCTCTGCCGATGTTTCTTTCGCAGAATCGAACCGACAAATTTGTTCCGTTCCTATAA
ACTCTGGTTGTTAATAAAGGGATGAAAAATCAATAAACTCTGCATGATAACACGTACAAA
CAGTGTCCTTCGTTGTTTTTTTAACCTACTTTGCTCTTATTTTCTTCTTTATTGTTCTTC
CCTAAACCTTGTTGTTTTCCTTGTTGCAGGCTGTAAATATGGCGCTAAATTTACCTTGTT
GTTCTAATAAATGTTAATAGTAATTAAAACAAACAAATAATTATTAGATTAGAGCTGGAG
CATTTGCAGTGGTAATGCTTGCTGTGTACAAAAATGTTGT

InterProScan

ProSiteProfiles	Prot_kinase_dom (IPR000719) - T[1-238] 18.45
SMART	Prot_kinase_dom (IPR000719) - T[2-238] 3.2E-8
Pfam	Prot_kinase_dom (IPR000719) - T[16-232] 2.1E-16
SUPERFAMILY	Kinase-like_dom_sf (IPR011009) - T[29-249] 2.52E-27

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PINK1_HUMAN	34.498 %	110	3.4E-27