Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S9...' > 
  2. Clone 'ciad063j17' > 
  3. Transcript 'Cisavi.CG.ENS81.R62....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R62.38754-50142.01866.t

Possible name(s)

CLDN1; CLDN17; CLDN19

Gene model

Cisavi.CG.ENS81.R62.38754-50142

Location

R62 [38,753 / 50,142]

Sequences

Amino acid sequence

Length: 153

>Cisavi.CG.ENS81.R62.38754-50142.01866.p
MGMYSQIACFVLGFMTATCIIVTTCWNEWATSSPGASVSLLGAIWAFSGLWDQCMQSTTG
QYQCDDYQVAMFQLPTHILGIRAMMCMSICFSVIGCFLLLIGMECSKLLDGNLGAKRKLM
GISGVLFLLSGVLVLASVSWYTAIVINDFFSVF

Nucleotide sequence

Length: 475

>Cisavi.CG.ENS81.R62.38754-50142.01866.t
CTCCAATATACAAAATGGGCATGTACAGCCAAATTGCCTGCTTTGTATTAGGATTCATGA
CGGCTACATGCATCATAGTGACCACCTGCTGGAACGAATGGGCCACATCCAGTCCTGGCG
CCAGTGTCTCACTCTTAGGGGCCATTTGGGCGTTCTCTGGCCTGTGGGATCAGTGTATGC
AAAGCACGACCGGACAGTACCAATGCGACGACTACCAGGTTGCAATGTTTCAATTGCCAA
CTCATATCCTTGGAATTCGAGCAATGATGTGCATGTCCATATGCTTCTCGGTGATCGGCT
GCTTTCTACTGCTGATTGGGATGGAATGCTCCAAATTACTTGATGGTAATCTTGGGGCAA
AGCGAAAACTCATGGGAATCAGTGGAGTTCTCTTTCTTTTATCTGGTGTATTGGTGCTCG
CGTCGGTTTCCTGGTACACTGCGATAGTCATCAACGATTTCTTCTCCGTGTTCAC

InterProScan

PANTHER
Claudin (IPR006187) - T[2-153] 1.5E-58
Pfam
PMP22/EMP/MP20/Claudin (IPR004031) - T[3-150] 1.5E-15
ProSitePatterns
Claudin_CS (IPR017974) - T[49-64] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLD19_HUMAN 34.091 % 83.6 1.48E-20
CLD1_HUMAN 30.137 % 77.8 2.44E-18
CLD17_HUMAN 34.694 % 87.8 4.75E-22