- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Cisavi.CG.ENS81.R259...' >
- Transcript 'Cisavi.CG.ENS81.R67....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R67.1114033-1118763.12790.t
Possible name(s)
FMR1; FXR1; FXR2
Gene model
Location
R67 [1,114,032 / 1,118,763]
Amino acid sequence
Length: 326
>Cisavi.CG.ENS81.R67.1114033-1118763.12790.p
MSKGEFHVIEYQTCDPKHTEIVTRDRLRRVNKSPLFSVNPVQKISLPVPEDLIQFCAKYI
DAHKEFEKSTDAIMVRFRPETKMLDVIVSTESSRRRASIVSELHFRSLRTKVAMLQKVED
AAKQLEMSQQRASSCSEHFQVSEDLMGLAIGTNGANIIAARRIPGVMDIILDEETHFFTV
YGETKEAVMKAREMLEFTEEEVLVPRSYVGKVIGKKGVTIQEMIDKSGVLRVRVIGDDEN
DPDHREDGLVPFRFVGTLESIRNAQALVDYHVAYLKDLDNLRLEQMNLTQQIRQLGGSNG
GGPSPASSHMSLHTLPPRGEDDRRYP
Nucleotide sequence
Length: 1,289
>Cisavi.CG.ENS81.R67.1114033-1118763.12790.t
GTATTTTTGTGGTGATTAACTTTCTTCTACGGTACCAAGAAAATGGAGAAAAGAACTGTT
GAAGTGCGTGGTTCAAACAGCGCATTCTACAAGGCTTTTCTTATTGATGTCTTTCCAGAT
GGTATATTGGTGTCTTTTGAAAACAATGGCAAGCAGAGCGCAAGATAGTTTTAAAAGAAG
CAAGGTTTTCCCCTCTGCCGGCTGATGCTTTAATACCTGAGGATGAAGAATTGTTAGAAG
GACAAAATATTGAGGTACACACCCGTGCCAATGACCTGGAACCTTGTGGATGGTGGCTAG
CCAAGGTAAAAATGAGCAAGGGGGAGTTTCATGTCATCGAATATCAAACATGCGATCCAA
AACATACCGAAATTGTGACCAGAGATCGCCTAAGAAGAGTCAATAAAAGCCCTCTGTTTA
GCGTTAACCCAGTTCAAAAAATTTCTTTACCTGTTCCTGAAGACTTGATACAATTTTGTG
CAAAATACATTGACGCCCATAAAGAATTTGAGAAAAGTACCGATGCAATCATGGTGCGAT
TTCGACCAGAGACAAAGATGCTTGACGTCATCGTCTCAACCGAATCATCTCGACGCCGCG
CATCAATAGTTTCCGAACTACACTTCCGAAGTCTGCGCACCAAAGTTGCCATGTTGCAAA
AAGTAGAGGACGCTGCCAAACAACTCGAGATGAGTCAGCAAAGAGCAAGTTCCTGTTCCG
AGCACTTCCAAGTGAGTGAAGACCTGATGGGGCTGGCCATCGGAACCAACGGTGCTAATA
TCATCGCCGCTCGCCGAATCCCTGGGGTCATGGACATCATATTGGACGAGGAGACCCATT
TCTTCACTGTGTATGGGGAGACCAAAGAAGCGGTGATGAAAGCAAGGGAGATGCTGGAAT
TTACAGAGGAGGAAGTGCTTGTTCCGCGCTCTTATGTCGGTAAAGTGATTGGAAAGAAAG
GAGTCACGATCCAAGAGATGATTGATAAATCTGGAGTCCTCCGTGTCCGAGTGATCGGTG
ATGATGAGAATGATCCGGATCACAGAGAGGATGGTCTGGTGCCGTTCCGATTTGTGGGAA
CATTAGAGAGCATTCGAAACGCACAGGCTCTTGTGGATTACCATGTTGCATATCTCAAGG
ATCTTGACAACCTTCGCTTGGAGCAGATGAACTTGACGCAGCAAATCCGACAGCTAGGTG
GCAGCAATGGGGGAGGGCCCTCTCCCGCTTCCTCCCACATGTCGTTGCATACGCTGCCAC
CTCGTGGTGAGGATGACCGTCGATATCCG
| ProSiteProfiles |
Agenet-like_dom (IPR008395) - T[1-30] 14.726 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[132-195] 7.3E-27 - T[196-276] 3.3E-23 |
| SMART |
KH_dom (IPR004087) - T[133-200] 0.052 - T[201-273] 0.0071 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[134-201] 5.69E-11 - T[199-273] 8.36E-11 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[137-196] 2.4E-4 - T[200-268] 6.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FXR1_HUMAN | 51.014 % | 303 | 1.38E-98 |
| FXR2_HUMAN | 51.515 % | 301 | 3.0E-97 |
| FMR1_HUMAN | 50.996 % | 243 | 1.95E-75 |