Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,852

>Cisavi.CG.ENS81.R67.1507499-1523609.14369.p
NKTMALTESSVDLKLVKRVQFGILSPDEIKRMSVTEGGVQYPEVTEGGRPKMLGLMDPRQ
GVVDRMSRCQTCASNMTDCPGHFGHIELARPVFHVGFLTKTIKILRCVCYYCSRLLVEKG
NPKIRQIMAKSKGQPRKRLAHVYELRGGDGQHLRLGHGGCGRYQPKIRRNGMELVAEWKH
VNEDSQEKKIVVSAERVHEIFKRISDEESDILGMDPRFARPEWMINTVIPVPPLCVRPSV
TMGGTSARSQDDLTHKLADIIKANQQLKRNEQNGTASHIILEDVKLLQYHVATLCDNDMP
GVPKALQKSGRPLKSIKQRLKAKEGRIRGNLMGKRVDFSARTVITPDPNLKIDEVGVPRS
IACNLTYPEIVTPFNIDRMQELVRRGNNQYPGAKYIIRDGGDRIDLRYHPKPSDLHLQVG
YKVERHIKDGDVIVFNRQPTLHKMSMMGHKVRVLPWSTFRMNLSVTTPYNADFDGDEMNM
HVPQTMETRAEILQLAMVNRMIITPQSNRPVMGIVQDTLTAVRKMTKRDSFIEKADFMNL
LMYLGDWDGYLPQPAILKPKPLWTGKQIFSLIIPPGINCIRNHSTHPDGEDTGPYKHISP
GDTRVLVENGILLSGIICKKSLGTSAGSLCHVVALEKSADVCREFYSNIQTVVNNWLMIE
GHSIGIGDTIADAQTYQDIQNQIRKAKQEVIERKLTKKIYNPTPGNTLRQTFENQVNRIL
NDARDKTGSSAQKSLSDFNNFKAMVVAGSKGSKINISQVIAVVGQQNVEGKRIPFGFRHR
TLPHFIKDDYGPEARGFVENSYLAGLTPTEFYFHAMGGREGLIDTAVKTAETGYIQRRLV
KAMEAVMVRYDGTIRQCNDYMIQLCYGEDGLAGEKVEFQNLATLKPSHKTFDKKFRFDYT
KERYMRRCLNEDIVRMIQTDVSIQQELDGEFDQLQQDRENIRAIFPTGDSKVVLPVNLGR
LIWNAQKIFHIDLRGPANLNPLRVIEGVRDLSKKLVIVCGEDRLSKEAQSNATLLFNVHL
RSTLCSRRVADEFRLSAEAFEWILGEVETKFQQAQVHPGEMVGALAAQSLGEPATQMTLN
TFHYAGVSAKNVTLGVPRLKELINVSKKPRTPSLTIYLVGPATRDAQHFQPLPTHRMVLC
RLEHATLRKVTANTAIYYDPDPMSTVIQEDQEFVNVYYEMPDFDVTRISSWLLRIELDRK
RMTDKKLSMEQIAEKISAGFGDDLNCIFNDDNAEKLVLRIRIMNRSVSLQLVSYVFEEQK
TDDGSDEQADKMEDDVFLRYIEANMLTDMTLQGIPQIAKVYMHLPKEENKKRIVITKEGE
FNAVQDWILETDGTALMRILSERDIDPVRTTSNDICEIFAVLGIEAVRKALEREINHVIS
FDGSYVNYRHLALLCEVMTSKGHLMAITRHGINRQETGALMRCSFEETVDILMEAASSAE
TDHMDGVSENIMLGQLVPGGTGCFGLLLDAEKCTYAMEIPTNIGGVGALLSPLGPGSPSS
PYIPSPKHSAMSPSYSPVSPAYEPGTPGTPQSPSYTPTSPTYSPTSPRYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYNPTSPSYSPTSPSYSPASP
SYSPTSPSYSPASPSYSPSSPKYSPASPSYSPASPEYSPSSPKYAPSSPSYSPASPSYSP
SSPSYSPSSPKYSPSSPSYSPASPSYSPTSPSYSPTSPSYSPTSPGYSPSSPSYSPSRYS
PSSPTYSPTSPSYSPASPQYTPTSPTYTPGGDLSPASPSYSPSSPGAESPTS

Nucleotide sequence

Length: 5,556

>Cisavi.CG.ENS81.R67.1507499-1523609.14369.t
AACAAAACCATGGCACTCACAGAATCTAGTGTGGATCTAAAACTTGTTAAACGAGTTCAG
TTTGGAATCCTCAGCCCAGATGAAATTAAACGAATGTCGGTGACGGAGGGTGGGGTTCAG
TACCCTGAGGTGACGGAAGGGGGAAGACCCAAGATGTTGGGTCTGATGGATCCCCGTCAA
GGCGTGGTTGATAGAATGTCCAGGTGTCAGACTTGCGCCAGCAACATGACCGACTGTCCC
GGACACTTCGGACATATTGAACTTGCACGACCCGTGTTTCATGTTGGATTTCTTACAAAA
ACCATCAAAATACTTCGTTGTGTGTGCTACTACTGCTCGAGGCTACTTGTGGAAAAGGGA
AACCCCAAAATCCGTCAAATCATGGCGAAATCGAAGGGTCAGCCGAGGAAGAGACTCGCG
CATGTGTACGAGTTGAGGGGAGGAGATGGACAACACCTTCGATTGGGGCATGGTGGCTGT
GGTCGTTACCAACCAAAGATCCGACGAAACGGGATGGAACTGGTTGCCGAGTGGAAACAC
GTCAACGAGGATTCGCAGGAGAAGAAGATCGTTGTCTCAGCTGAGCGTGTTCATGAGATA
TTTAAGAGAATCTCCGACGAGGAATCTGACATCCTCGGCATGGACCCAAGGTTTGCTCGT
CCCGAATGGATGATTAACACCGTGATACCTGTTCCCCCACTGTGTGTACGTCCATCCGTC
ACTATGGGAGGCACCAGTGCGAGAAGTCAGGATGATTTAACGCACAAGTTGGCTGACATT
ATTAAAGCCAACCAACAGTTAAAACGAAATGAACAAAACGGAACTGCCTCCCATATTATA
TTAGAAGATGTGAAGTTACTACAGTACCATGTTGCTACACTGTGTGATAACGATATGCCT
GGAGTTCCCAAGGCGTTGCAAAAATCCGGTCGCCCTTTGAAATCGATCAAACAGCGTCTG
AAAGCAAAGGAGGGTAGGATAAGAGGGAACTTGATGGGTAAGCGGGTGGACTTCTCCGCT
CGTACCGTCATTACCCCTGACCCCAATCTTAAAATTGATGAGGTTGGTGTGCCACGCTCC
ATCGCATGCAACCTGACGTACCCCGAGATCGTCACCCCATTCAACATCGATCGGATGCAG
GAACTTGTTCGACGGGGGAACAACCAGTACCCCGGGGCGAAATACATCATCCGAGACGGT
GGGGATCGTATCGACCTCCGGTATCACCCCAAACCCTCCGATCTGCATCTGCAAGTGGGC
TACAAGGTTGAGCGGCACATAAAAGATGGCGACGTGATTGTGTTCAACCGACAGCCCACT
CTGCACAAGATGTCCATGATGGGACATAAAGTCAGAGTTCTGCCCTGGTCTACTTTTAGA
ATGAATTTATCGGTAACGACGCCGTACAACGCTGATTTCGATGGAGACGAGATGAACATG
CACGTCCCGCAAACCATGGAAACGAGAGCCGAGATCCTCCAACTCGCCATGGTGAACCGG
ATGATCATCACTCCACAGAGCAATCGGCCGGTCATGGGAATTGTGCAGGACACACTGACC
GCCGTCCGCAAAATGACCAAGCGGGATTCCTTCATTGAAAAGGCCGACTTCATGAACCTG
TTAATGTACCTGGGTGATTGGGACGGGTACCTCCCCCAACCTGCGATCCTCAAACCCAAG
CCTCTCTGGACGGGGAAGCAGATCTTCTCGCTCATCATCCCCCCTGGGATAAACTGCATC
CGGAACCACAGCACCCATCCTGATGGGGAGGACACTGGACCTTATAAGCACATCTCACCC
GGGGATACAAGGGTGCTGGTGGAGAACGGTATCTTGCTGAGCGGAATAATATGTAAGAAG
TCGCTGGGTACGTCTGCGGGGTCTCTATGTCACGTGGTTGCACTGGAGAAATCTGCCGAT
GTGTGCCGAGAGTTCTATAGCAATATACAGACTGTGGTGAACAACTGGTTGATGATTGAG
GGACATTCCATCGGTATCGGAGATACCATTGCCGATGCACAAACCTACCAAGATATTCAA
AACCAGATCAGGAAAGCAAAGCAGGAAGTCATAGAGAGAAAGCTCACAAAGAAGATTTAC
AACCCCACTCCTGGTAATACTCTGCGGCAGACATTTGAAAATCAAGTCAACAGGATTCTG
AACGATGCCCGTGACAAAACTGGTTCATCTGCTCAGAAGAGTTTATCAGACTTCAACAAC
TTTAAAGCTATGGTGGTGGCTGGCTCTAAAGGGTCCAAAATCAACATCTCCCAGGTTATT
GCTGTTGTGGGTCAACAGAACGTGGAAGGAAAGCGGATCCCATTTGGGTTTCGTCACCGA
ACCCTGCCCCATTTTATTAAGGATGATTATGGTCCAGAGGCTCGTGGGTTTGTGGAGAAC
TCGTACCTTGCTGGGTTGACCCCAACCGAGTTTTACTTCCATGCCATGGGAGGTAGAGAG
GGTCTCATCGATACTGCTGTCAAAACTGCCGAAACTGGTTACATCCAGCGTCGACTGGTG
AAAGCCATGGAAGCGGTTATGGTGCGATACGACGGCACGATACGACAATGTAACGATTAC
ATGATCCAGCTCTGCTACGGGGAAGATGGCTTGGCTGGGGAAAAGGTGGAGTTCCAGAAC
CTCGCCACGCTTAAACCAAGCCACAAAACCTTCGACAAGAAATTCCGATTCGACTACACC
AAGGAGCGATACATGCGTCGATGTTTGAACGAGGATATCGTCCGAATGATCCAGACCGAC
GTCTCCATCCAACAGGAGCTCGATGGCGAGTTCGACCAGTTACAGCAGGACAGGGAAAAT
ATTCGAGCCATTTTTCCAACCGGGGACAGCAAGGTTGTATTACCCGTCAACTTGGGCCGA
TTGATCTGGAACGCACAAAAGATCTTCCACATCGACCTGAGAGGTCCCGCCAACCTCAAC
CCGCTCCGAGTGATCGAGGGAGTCCGGGATCTCAGCAAGAAACTCGTCATCGTGTGCGGG
GAGGATCGACTGAGCAAGGAGGCGCAGAGCAACGCCACTCTGCTCTTCAACGTTCATCTG
AGATCCACGTTGTGCTCTCGGAGAGTTGCAGATGAGTTCCGACTCTCGGCTGAAGCGTTT
GAATGGATTCTGGGGGAAGTTGAAACTAAGTTCCAACAAGCTCAGGTTCACCCTGGTGAG
ATGGTGGGTGCACTCGCTGCCCAGTCCCTGGGAGAACCCGCCACCCAGATGACCCTGAAC
ACTTTCCACTACGCCGGTGTGTCGGCGAAGAACGTAACCCTCGGAGTACCCCGGTTGAAG
GAGTTGATCAACGTATCGAAGAAACCCCGAACCCCCTCACTCACCATATACCTCGTGGGG
CCGGCTACCAGGGATGCACAGCACTTCCAACCATTACCCACTCACAGGATGGTGTTGTGT
CGTCTGGAGCACGCCACCCTCCGCAAGGTGACGGCGAACACGGCGATCTACTACGATCCG
GACCCCATGAGCACAGTCATCCAGGAGGACCAGGAATTCGTCAATGTCTATTACGAGATG
CCGGACTTTGATGTTACAAGGATTTCATCGTGGCTGCTCCGTATTGAACTCGACCGGAAG
AGAATGACAGACAAGAAACTGAGTATGGAGCAAATTGCGGAGAAGATCAGTGCTGGGTTC
GGTGACGATTTGAATTGTATTTTCAATGACGACAATGCAGAGAAGCTGGTATTACGAATT
CGTATTATGAACAGGTCAGTATCGCTGCAATTAGTTTCTTATGTATTTGAGGAGCAGAAG
ACTGATGACGGATCGGATGAGCAAGCTGATAAGATGGAGGATGACGTCTTCCTCCGATAC
ATTGAAGCTAATATGCTTACCGACATGACTCTACAGGGAATTCCACAAATTGCAAAGGTA
TACATGCACTTGCCAAAAGAAGAAAACAAAAAGCGAATCGTTATTACAAAGGAGGGGGAG
TTTAACGCCGTTCAAGATTGGATTTTGGAAACCGACGGCACAGCTCTGATGAGGATTTTA
TCGGAGCGCGATATCGACCCGGTCCGAACCACCTCCAACGACATCTGCGAGATTTTCGCT
GTCCTCGGTATTGAAGCTGTGCGGAAAGCTCTGGAACGGGAAATTAACCACGTCATTTCC
TTTGACGGTTCCTACGTCAACTACCGTCATCTTGCGCTGCTGTGTGAGGTCATGACTTCA
AAGGGACATTTGATGGCGATCACGAGACACGGGATAAATCGGCAAGAGACAGGCGCACTC
ATGAGATGCTCCTTTGAAGAGACAGTCGATATTTTAATGGAGGCTGCATCATCGGCAGAA
ACTGACCACATGGATGGCGTGTCGGAAAACATAATGTTGGGCCAGTTGGTACCGGGTGGA
ACCGGTTGCTTCGGCTTACTGCTCGATGCAGAGAAGTGCACCTATGCCATGGAGATACCA
ACCAACATTGGAGGAGTTGGGGCCCTGCTCAGTCCCCTGGGCCCCGGCAGCCCATCATCT
CCCTATATCCCGTCACCCAAACACTCTGCGATGTCACCCAGCTATTCCCCAGTATCCCCA
GCTTACGAACCAGGGACTCCGGGCACCCCACAAAGCCCCAGTTACACCCCAACAAGTCCA
ACATATTCACCCACCTCACCTCGGTATTCCCCAACCAGCCCCAGCTACAGCCCCACATCA
CCCAGCTATTCACCCACGTCACCCTCCTACAGCCCCACGTCTCCATCTTATTCACCCACA
AGTCCATCCTATTCACCCACCTCTCCAAGTTACAGTCCTACTTCACCGAGTTACAGCCCC
ACTTCACCCAGCTACTCCCCAACCTCACCCTCATATAGCCCCACTTCTCCAAGCTACAGC
CCCACATCCCCAAGTTATTCACCCACCAGCCCATCTTACTCTCCAACAAGCCCCAGTTAC
TCTCCAACCTCCCCCAGCTATTCACCCACATCACCCAGTTACAGCCCCACATCACCCTCA
TATAACCCAACCAGTCCATCGTACTCCCCAACAAGCCCCTCTTATTCACCTGCAAGCCCC
AGTTACTCCCCTACCTCCCCAAGTTACAGTCCAGCGTCACCCAGCTACTCACCCTCAAGC
CCCAAATACTCCCCAGCCAGCCCATCTTACAGTCCAGCATCCCCCGAATACAGCCCATCA
AGCCCCAAGTACGCCCCGTCATCTCCATCCTACTCGCCAGCTTCACCCTCCTACAGCCCA
TCTTCACCCAGTTATTCCCCATCCAGCCCGAAATATTCTCCGTCAAGCCCCTCATATTCT
CCAGCAAGCCCTTCATACTCACCCACCAGCCCCTCATATTCACCTACAAGCCCCTCGTAC
TCTCCAACGAGCCCCGGGTATTCACCTTCCTCACCCAGCTACTCCCCATCAAGGTATTCC
CCAAGCAGCCCCACATATTCTCCAACCAGTCCGTCCTACTCACCTGCGAGCCCCCAATAT
ACCCCCACAAGCCCCACATACACTCCGGGCGGGGACCTATCACCTGCTTCACCAAGCTAC
AGCCCCTCATCACCAGGAGCAGAGAGCCCAACGAGT

InterProScan

Pfam	RNA_pol_Rpb1_1 (IPR007080) - T[14-331] 4.5E-103
SMART	RNA_pol_N (IPR006592) - T[222-526] 3.3E-198
Pfam	RNA_pol_asu (IPR000722) - T[333-498] 4.2E-75
Pfam	RNA_pol_Rpb1_3 (IPR007066) - T[502-669] 1.9E-50
Gene3D	Rpb1_funnel_sf (IPR038120) - T[664-807] 1.3E-49
Pfam	RNA_pol_Rpb1_4 (IPR007083) - T[697-798] 7.6E-36
Pfam	RNA_pol_Rpb1_5 (IPR007081) - T[805-1419] 4.5E-97
Pfam	RNA_pol_Rpb1_6 (IPR007075) - T[871-1054] 6.9E-67
Gene3D	RNA_pol_Rpb1_7_sf (IPR038593) - T[1145-1293] 5.3E-54
Pfam	RNA_pol_Rpb1_7 (IPR007073) - T[1145-1292] 3.4E-54
Pfam	RNA_pol_II_repeat_euk (IPR000684) - T[1516-1528] 1.6 - T[1530-1542] 7.0 - T[1543-1556] 0.11 - T[1557-1570] 0.35 - T[1571-1584] 0.42 - T[1585-1598] 0.48 - T[1592-1605] 0.56 - T[1599-1612] 0.56 - T[1606-1619] 0.63 - T[1613-1626] 0.58 - T[1620-1633] 0.65 - T[1627-1640] 0.58 - T[1634-1647] 0.65 - T[1641-1654] 0.56 - T[1648-1661] 0.68 - T[1655-1668] 2.1 - T[1662-1675] 1.1 - T[1669-1682] 1.9 - T[1676-1689] 1.2 - T[1683-1696] 2.0 - T[1690-1703] 0.54 - T[1697-1710] 7.0 - T[1704-1717] 1.1 - T[1732-1745] 12.0 - T[1739-1752] 11.0 - T[1760-1773] 1.2 - T[1767-1780] 0.63 - T[1774-1787] 0.058 - T[1781-1794] 0.31 - T[1814-1827] 0.045
ProSitePatterns	RNA_pol_II_repeat_euk (IPR000684) - T[1535-1541] . - T[1549-1555] . - T[1556-1562] . - T[1570-1576] . - T[1577-1583] . - T[1584-1590] . - T[1591-1597] . - T[1605-1611] . - T[1612-1618] . - T[1619-1625] . - T[1626-1632] . - T[1640-1646] . - T[1647-1653] . - T[1654-1660] . - T[1682-1688] . - T[1696-1702] . - T[1766-1772] . - T[1773-1779] . - T[1787-1793] . - T[1806-1812] . - T[1820-1826] .