Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,748

>Cisavi.CG.ENS81.R67.1507499-1523609.14370.p
NKTMALTESSVDLKLVKRVQFGILSPDEIKRMSVTEGGVQYPEVTEGGRPKMLGLMDPRQ
GVVDRMSRCQTCASNMTDCPGHFGHIELARPVFHVGFLTKTIKILRCVCYYCSRLLVEKG
NPKIRQIMAKSKGQPRKRLAHVYELCKGKNICEGGEEMDNTFDVQQRDEDEPRKVGHGGC
GRYQPKIRRNGMELVAEWKHVNEDSQEKKIVVSAERVHEIFKRISDEESDILGMDPRFAR
PEWMINTVIPVPPLCVRPSVTMGGTSARSQDDLTHKLADIIKANQQLKRNEQNGTASHII
LEDVKLLQYHVATLCDNDMPGVPKALQKSGRPLKSIKQRLKAKEGRIRGNLMGKRVDFSA
RTVITPDPNLKIDEVGVPRSIACNLTYPEIVTPFNIDRMQELVRRGNNQYPGAKYIIRDG
GDRIDLRYHPKPSDLHLQVGYKVERHIKDGDVIVFNRQPTLHKMSMMGHKVRVLPWSTFR
MNLSVTTPYNADFDGDEMNMHVPQTMETRAEILQLAMVNRMIITPQSNRPVMGIVQDTLT
AVRKMTKRDSFIEKADFMNLLMYLGDWDGYLPQPAILKPKPLWTGKQIFSLIIPPGINCI
RNHSTHPDGEDTGPYKHISPGDTRVLVENGILLSGIICKKSLGTSAGSLCHVVALEKSAD
VCREFYSNIQTVVNNWLMIEGHSIGIGDTIADAQTYQDIQNQIRKAKQEVIERKLTKKIY
NPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSDFNNFKAMVVAGSKGSKINISQVI
AVVGQQNVEGKRIPFGFRHRTLPHFIKDDYGPEARGFVENSYLAGLTPTEFYFHAMGGRE
GLIDTAVKTAETGYIQRRLVKAMEAVMVRYDGTIRQCNDYMIQLCYGEDGLAGEKVEFQN
LATLKPSHKTFDKKFRFDYTKERYMRRCLNEDIVRMIQTDVSIQQELDGEFDQLQQDREN
IRAIFPTGDSKVVLPVNLGRLIWNAQKIFHIDLRGPANLNPLRVIEGVRDLSKKLVIVCG
EDRLSKEAQSNATLLFNVHLRSTLCSRRVADEFRLSAEAFEWILGEVETKFQQAQVHPGE
MVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINVSKKPRTPSLTIYLVG
PATRDAQHFQPLPTHRMVLCRLEHATLRKVTANTAIYYDPDPMSTVIQEDQEFVNVYYEM
PDFDVTRISSWLLRIELDRKRMTDKKLSMEQIAEKISAGFGDDLNCIFNDDNAEKLVLRI
RIMNSEEQKTDDGSDEQADKMEDDVFLRYIEANMLTDMTLQGIPQIAKVYMHLPKEENKK
RIVITKEGEFNAVQDWILETDGTALMRILSERDIDPVRTTSNDICEIFAVLGIEAVRKAL
EREINHVISFDGSYVNYRHLALLCEVMTSKGHLMAITRHGINRQETGALMRCSFEETVDI
LMEAASSAETDHMDGVSENIMLGQLVPGGTGCFGLLLDAEKCTYAMEIPTNIGGVGGSPS
SPYIPSPKHSAMSPSYSPVSPAYEPGTPGTPQSPSYTPTSPTYSPTSPRYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYNPTSPSYSPTSPSYSPAS
PSYSPTSPTSPSYSPSSPSYSPSSPKYSPSSPSYSPASPSYSPTSPSYSPTSPSYSPTSP
GYSPSSPS

Nucleotide sequence

Length: 5,244

>Cisavi.CG.ENS81.R67.1507499-1523609.14370.t
AACAAAACCATGGCACTCACAGAATCTAGTGTGGATCTAAAACTTGTTAAACGAGTTCAG
TTTGGAATCCTCAGCCCAGATGAAATTAAACGAATGTCGGTGACGGAGGGTGGGGTTCAG
TACCCTGAGGTGACGGAAGGGGGAAGACCCAAGATGTTGGGTCTGATGGATCCCCGTCAA
GGCGTGGTTGATAGAATGTCCAGGTGTCAGACTTGCGCCAGCAACATGACCGACTGTCCC
GGACACTTCGGACATATTGAACTTGCACGACCCGTGTTTCATGTTGGATTTCTTACAAAA
ACCATCAAAATACTTCGTTGTGTGTGCTACTACTGCTCGAGGCTACTTGTGGAAAAGGGA
AACCCCAAAATCCGTCAAATCATGGCGAAATCGAAGGGTCAGCCGAGGAAGAGACTCGCG
CATGTGTACGAGTTGTGCAAAGGGAAGAACATCTGCGAAGGAGGGGAGGAGATGGACAAC
ACCTTCGATGTTCAACAGCGTGATGAAGATGAACCGAGGAAAGTGGGGCATGGTGGCTGT
GGTCGTTACCAACCAAAGATCCGACGAAACGGGATGGAACTGGTTGCCGAGTGGAAACAC
GTCAACGAGGATTCGCAGGAGAAGAAGATCGTTGTCTCAGCTGAGCGTGTTCATGAGATA
TTTAAGAGAATCTCCGACGAGGAATCTGACATCCTCGGCATGGACCCAAGGTTTGCTCGT
CCCGAATGGATGATTAACACCGTGATACCTGTTCCCCCACTGTGTGTACGTCCATCCGTC
ACTATGGGAGGCACCAGTGCGAGAAGTCAGGATGATTTAACGCACAAGTTGGCTGACATT
ATTAAAGCCAACCAACAGTTAAAACGAAATGAACAAAACGGAACTGCCTCCCATATTATA
TTAGAAGATGTGAAGTTACTACAGTACCATGTTGCTACACTGTGTGATAACGATATGCCT
GGAGTTCCCAAGGCGTTGCAAAAATCCGGTCGCCCTTTGAAATCGATCAAACAGCGTCTG
AAAGCAAAGGAGGGTAGGATAAGAGGGAACTTGATGGGTAAGCGGGTGGACTTCTCCGCT
CGTACCGTCATTACCCCTGACCCCAATCTTAAAATTGATGAGGTTGGTGTGCCACGCTCC
ATCGCATGCAACCTGACGTACCCCGAGATCGTCACCCCATTCAACATCGATCGGATGCAG
GAACTTGTTCGACGGGGGAACAACCAGTACCCCGGGGCGAAATACATCATCCGAGACGGT
GGGGATCGTATCGACCTCCGGTATCACCCCAAACCCTCCGATCTGCATCTGCAAGTGGGC
TACAAGGTTGAGCGGCACATAAAAGATGGCGACGTGATTGTGTTCAACCGACAGCCCACT
CTGCACAAGATGTCCATGATGGGACATAAAGTCAGAGTTCTGCCCTGGTCTACTTTTAGA
ATGAATTTATCGGTAACGACGCCGTACAACGCTGATTTCGATGGAGACGAGATGAACATG
CACGTCCCGCAAACCATGGAAACGAGAGCCGAGATCCTCCAACTCGCCATGGTGAACCGG
ATGATCATCACTCCACAGAGCAATCGGCCGGTCATGGGAATTGTGCAGGACACACTGACC
GCCGTCCGCAAAATGACCAAGCGGGATTCCTTCATTGAAAAGGCCGACTTCATGAACCTG
TTAATGTACCTGGGTGATTGGGACGGGTACCTCCCCCAACCTGCGATCCTCAAACCCAAG
CCTCTCTGGACGGGGAAGCAGATCTTCTCGCTCATCATCCCCCCTGGGATAAACTGCATC
CGGAACCACAGCACCCATCCTGATGGGGAGGACACTGGACCTTATAAGCACATCTCACCC
GGGGATACAAGGGTGCTGGTGGAGAACGGTATCTTGCTGAGCGGAATAATATGTAAGAAG
TCGCTGGGTACGTCTGCGGGGTCTCTATGTCACGTGGTTGCACTGGAGAAATCTGCCGAT
GTGTGCCGAGAGTTCTATAGCAATATACAGACTGTGGTGAACAACTGGTTGATGATTGAG
GGACATTCCATCGGTATCGGAGATACCATTGCCGATGCACAAACCTACCAAGATATTCAA
AACCAGATCAGGAAAGCAAAGCAGGAAGTCATAGAGAGAAAGCTCACAAAGAAGATTTAC
AACCCCACTCCTGGTAATACTCTGCGGCAGACATTTGAAAATCAAGTCAACAGGATTCTG
AACGATGCCCGTGACAAAACTGGTTCATCTGCTCAGAAGAGTTTATCAGACTTCAACAAC
TTTAAAGCTATGGTGGTGGCTGGCTCTAAAGGGTCCAAAATCAACATCTCCCAGGTTATT
GCTGTTGTGGGTCAACAGAACGTGGAAGGAAAGCGGATCCCATTTGGGTTTCGTCACCGA
ACCCTGCCCCATTTTATTAAGGATGATTATGGTCCAGAGGCTCGTGGGTTTGTGGAGAAC
TCGTACCTTGCTGGGTTGACCCCAACCGAGTTTTACTTCCATGCCATGGGAGGTAGAGAG
GGTCTCATCGATACTGCTGTCAAAACTGCCGAAACTGGTTACATCCAGCGTCGACTGGTG
AAAGCCATGGAAGCGGTTATGGTGCGATACGACGGCACGATACGACAATGTAACGATTAC
ATGATCCAGCTCTGCTACGGGGAAGATGGCTTGGCTGGGGAAAAGGTGGAGTTCCAGAAC
CTCGCCACGCTTAAACCAAGCCACAAAACCTTCGACAAGAAATTCCGATTCGACTACACC
AAGGAGCGATACATGCGTCGATGTTTGAACGAGGATATCGTCCGAATGATCCAGACCGAC
GTCTCCATCCAACAGGAGCTCGATGGCGAGTTCGACCAGTTACAGCAGGACAGGGAAAAT
ATTCGAGCCATTTTTCCAACCGGGGACAGCAAGGTTGTATTACCCGTCAACTTGGGCCGA
TTGATCTGGAACGCACAAAAGATCTTCCACATCGACCTGAGAGGTCCCGCCAACCTCAAC
CCGCTCCGAGTGATCGAGGGAGTCCGGGATCTCAGCAAGAAACTCGTCATCGTGTGCGGG
GAGGATCGACTGAGCAAGGAGGCGCAGAGCAACGCCACTCTGCTCTTCAACGTTCATCTG
AGATCCACGTTGTGCTCTCGGAGAGTTGCAGATGAGTTCCGACTCTCGGCTGAAGCGTTT
GAATGGATTCTGGGGGAAGTTGAAACTAAGTTCCAACAAGCTCAGGTTCACCCTGGTGAG
ATGGTGGGTGCACTCGCTGCCCAGTCCCTGGGAGAACCCGCCACCCAGATGACCCTGAAC
ACTTTCCACTACGCCGGTGTGTCGGCGAAGAACGTAACCCTCGGAGTACCCCGGTTGAAG
GAGTTGATCAACGTATCGAAGAAACCCCGAACCCCCTCACTCACCATATACCTCGTGGGG
CCGGCTACCAGGGATGCACAGCACTTCCAACCATTACCCACTCACAGGATGGTGTTGTGT
CGTCTGGAGCACGCCACCCTCCGCAAGGTGACGGCGAACACGGCGATCTACTACGATCCG
GACCCCATGAGCACAGTCATCCAGGAGGACCAGGAATTCGTCAATGTCTATTACGAGATG
CCGGACTTTGATGTTACAAGGATTTCATCGTGGCTGCTCCGTATTGAACTCGACCGGAAG
AGAATGACAGACAAGAAACTGAGTATGGAGCAAATTGCGGAGAAGATCAGTGCTGGGTTC
GGTGACGATTTGAATTGTATTTTCAATGACGACAATGCAGAGAAGCTGGTATTACGAATT
CGTATTATGAACAGTGAGGAGCAGAAGACTGATGACGGATCGGATGAGCAAGCTGATAAG
ATGGAGGATGACGTCTTCCTCCGATACATTGAAGCTAATATGCTTACCGACATGACTCTA
CAGGGAATTCCACAAATTGCAAAGGTATACATGCACTTGCCAAAAGAAGAAAACAAAAAG
CGAATCGTTATTACAAAGGAGGGGGAGTTTAACGCCGTTCAAGATTGGATTTTGGAAACC
GACGGCACAGCTCTGATGAGGATTTTATCGGAGCGCGATATCGACCCGGTCCGAACCACC
TCCAACGACATCTGCGAGATTTTCGCTGTCCTCGGTATTGAAGCTGTGCGGAAAGCTCTG
GAACGGGAAATTAACCACGTCATTTCCTTTGACGGTTCCTACGTCAACTACCGTCATCTT
GCGCTGCTGTGTGAGGTCATGACTTCAAAGGGACATTTGATGGCGATCACGAGACACGGG
ATAAATCGGCAAGAGACAGGCGCACTCATGAGATGCTCCTTTGAAGAGACAGTCGATATT
TTAATGGAGGCTGCATCATCGGCAGAAACTGACCACATGGATGGCGTGTCGGAAAACATA
ATGTTGGGCCAGTTGGTACCGGGTGGAACCGGTTGCTTCGGCTTACTGCTCGATGCAGAG
AAGTGCACCTATGCCATGGAGATACCAACCAACATTGGAGGAGTTGGGGGTAGCCCATCA
TCTCCCTATATCCCGTCACCCAAACACTCTGCGATGTCACCCAGCTATTCCCCAGTATCC
CCAGCTTACGAACCAGGGACTCCGGGCACCCCACAAAGCCCCAGTTACACCCCAACAAGT
CCAACATATTCACCCACCTCACCTCGGTATTCCCCAACCAGCCCCAGCTACAGCCCCACA
TCACCCAGCTATTCACCCACGTCACCCTCCTACAGCCCCACGTCTCCATCTTATTCACCC
ACAAGTCCATCCTATTCACCCACCTCTCCAAGTTACAGTCCTACTTCACCGAGTTACAGC
CCCACTTCACCCAGCTACTCCCCAACCTCACCCTCATATAGCCCCACTTCTCCAAGCTAC
AGCCCCACATCCCCAAGTTATTCACCCACCAGCCCATCTTACTCTCCAACAAGCCCCAGT
TACTCTCCAACCTCCCCCAGCTATTCACCCACATCACCCAGTTACAGCCCCACATCACCC
TCATATAACCCAACCAGTCCATCGTACTCCCCAACAAGCCCCTCTTATTCACCTGCAAGC
CCCAGTTACTCCCCTACCTCCCCAACTTCACCCTCCTACAGCCCATCTTCACCCAGTTAT
TCCCCATCCAGCCCGAAATATTCTCCGTCAAGCCCCTCATATTCTCCAGCAAGCCCTTCA
TACTCACCCACCAGCCCCTCATATTCACCTACAAGCCCCTCGTACTCTCCAACGAGCCCC
GGGTATTCACCTTCCTCACCCAGC

InterProScan

Pfam	RNA_pol_Rpb1_1 (IPR007080) - T[14-351] 1.7E-107
SMART	RNA_pol_N (IPR006592) - T[242-546] 3.3E-198
Pfam	RNA_pol_asu (IPR000722) - T[353-518] 3.9E-75
Pfam	RNA_pol_Rpb1_3 (IPR007066) - T[522-689] 1.8E-50
Gene3D	Rpb1_funnel_sf (IPR038120) - T[684-827] 1.2E-49
Pfam	RNA_pol_Rpb1_4 (IPR007083) - T[717-818] 7.1E-36
Pfam	RNA_pol_Rpb1_5 (IPR007081) - T[825-1428] 3.7E-97
Pfam	RNA_pol_Rpb1_6 (IPR007075) - T[891-1074] 6.4E-67
Pfam	RNA_pol_Rpb1_7 (IPR007073) - T[1165-1301] 1.5E-55
Gene3D	RNA_pol_Rpb1_7_sf (IPR038593) - T[1165-1302] 4.1E-56
Pfam	RNA_pol_II_repeat_euk (IPR000684) - T[1517-1529] 1.6 - T[1531-1543] 6.6 - T[1544-1557] 0.021 - T[1558-1571] 0.41 - T[1572-1585] 0.46 - T[1579-1592] 0.53 - T[1586-1599] 0.49 - T[1593-1606] 0.59 - T[1600-1613] 0.57 - T[1607-1620] 0.65 - T[1614-1627] 0.54 - T[1621-1634] 0.63 - T[1628-1641] 0.53 - T[1635-1648] 0.57 - T[1642-1655] 0.49 - T[1649-1662] 0.54 - T[1663-1676] 1.2 - T[1687-1700] 5.3 - T[1694-1707] 7.8 - T[1715-1728] 1.0 - T[1722-1735] 0.65 - T[1729-1742] 0.027 - T[1736-1748] 0.82
ProSitePatterns	RNA_pol_II_repeat_euk (IPR000684) - T[1536-1542] . - T[1550-1556] . - T[1557-1563] . - T[1571-1577] . - T[1578-1584] . - T[1585-1591] . - T[1592-1598] . - T[1606-1612] . - T[1613-1619] . - T[1620-1626] . - T[1627-1633] . - T[1641-1647] . - T[1648-1654] . - T[1655-1661] . - T[1721-1727] . - T[1728-1734] . - T[1742-1748] .