Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,971

>Cisavi.CG.ENS81.R67.1507499-1523609.14376.p
ESSVDLKLVKRVQFGILSPDEIKRMSVTEGGVQYPEVTEGGRPKMLGLMDPRQGVVDRMS
RCSTCASNMTDCPGHFGHIELARPVFHVGFLTKTIKILRCVCYYCSRLLVEKGNPKIRQI
MAKSKGQPRKRLAHVYELCKGKNICEGGEEMDNTFDVQQRDEDEPRKVGHGGCGRYQPKI
RRNGMELVAEWKHVNEDSQEKKIVVSAERVHEIFKRISDEESDILGMDPRFARPEWMINT
VIPVPPLCVRPSVTMGGTSARSQDDLTHKLADIIKANQQLKRNEQNGTASHIILEDVKLL
QYHVATLCDNDMPGVPKALQKSGRPLKSIKQRLKAKEGRIRGNLMGKRVDFSARTVITPD
PNLKIDEVGVPRSIACNLTYPEIVTPFNIDRMQELVRRGNNQYPGAKYIIRDGGDRIDLR
YHPKPSDLHLQVGYKVERHIKDGDVIVFNRQPTLHKMSMMGHKVRVLPWSTFRMNLSVTT
PYNADFDGDEMNMHVPQTMETRAEILQLAMVNRMIITPQSNRPVMGIVQDTLTAVRKMTK
RDSFIEKADFMNLLMYLGDWDGYLPQPAILKPKPLWTGKQIFSLIIPPGINCIRNHSTHP
DGEDTGPYKHISPGDTRVLVENGILLSGIICKKSLGTSAGSLCHVVALEKSADVCREFYS
NIQTVVNNWLMIEGHSIGIGDTIADAQTYQDIQNQIRKAKQEVIEVIEKAHKEDLPTPGN
TLRQTFENQVNRILNDARDKTGSSAQKSLSDFNNFKAMVVAGSKGSKINISQVIAVVGQQ
NVEGKRIPFGFRHRTLPHFIKDDYGPEARGFVENSYLAGLTPTEFYFHAMGGREGLIDTA
VKTAETGYIQRRLVKAMEAVMVRYDGTIRQCNDYMIQLCYGEDGLAGEKVEFQNLATLKP
SHKTFDKKFRFDYTKERYMRRCLNEDIVRMIQTDVSIQQELDGEFDQLQQDRENIRAIFP
TGDSKVVLPVNLGRLIWNAQKIFHIDLRGPANLNPLRVIEGVRDLSKKLVIVCGEDRLSK
EAQSNATLLFNVHLRSTLCSRRVADEFRLSAEAFEWILGEVETKFQQAQVHPGEMVGALA
AQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINVSKKPRTPSLTIYLVGPATRDA
QHFQPLPTHRMVLCRLEHATLRKVTANTAIYYDPDPMSTVIQEDQEFVNVYYEMPDFDVT
RISSWLLRIELDRKRMTDKKLSMEQIAEKISAGFGDDLNCIFNDDNAEKLVLRIRIMNSE
EQKTDDGSDEQADKMEDDVFLRYIEANMLTDMTLQGIPQIAKVYMHLPKEENKKRIVITK
EGEFNAVQDWILETDGTALMRILSERDIDPVRTTSNDICEIFAVLGIEAVRKALEREINH
VISFDGSYVNYRHLALLCEVMTSKGHLMAITRHGINRQETGALMRCSFEETVDILMEAAS
SAETDHMDGVSENIMLGQLVPGGTGCFGLLLDAEKCTYAMEIPTNIGGVGGTGMFYGSMA
SPSSMSPAMTPWNSGAATPGFMGSFTPGGFGSGMTPSAASFSPAPTESAGFSPGYSPAWS
PAQSPGPGSPSSPYIPSPKHSAMSPSYSPVSPAYEPGTPGTPQSPSYTPTSPTYSPTSPR
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYNPTSPSY
SPTSPSYSPASPSYSPTSPSYSPASPSYSPSSPKYSPASPSYSPASPEYSPSSPKYAPSS
PSYSPASPSYSPSSPSYSPSSPKYSPSSPSYSPASPSYSPTSPSYSPTSPSYSPTSPGYS
PSSPSYSPSRYSPSSPTYSPTSPSYSPASPQYTPTSPTYTPGGDLSPASPSYSPSSPGAE
SPTSPSYSPSSPSYSPASPMYSPTSPGYSPSSPGYSPTSPSYTPSTPGGGV

Nucleotide sequence

Length: 5,913

>Cisavi.CG.ENS81.R67.1507499-1523609.14376.t
GAATCTAGTGTGGATCTAAAACTTGTTAAACGAGTTCAGTTTGGAATCCTCAGCCCAGAT
GAAATTAAACGAATGTCGGTGACGGAGGGTGGGGTTCAGTACCCTGAGGTGACGGAAGGG
GGAAGACCCAAGATGTTGGGTCTGATGGATCCCCGTCAAGGCGTGGTTGATAGAATGTCC
AGGTGCAGTACTTGCGCCAGCAACATGACCGACTGTCCCGGACACTTCGGACATATTGAA
CTTGCACGACCCGTGTTTCATGTTGGATTTCTTACAAAAACCATCAAAATACTTCGTTGT
GTGTGCTACTACTGCTCGAGGCTACTTGTGGAAAAGGGAAACCCCAAAATCCGTCAAATC
ATGGCGAAATCGAAGGGTCAGCCGAGGAAGAGACTCGCGCATGTGTACGAGTTGTGCAAA
GGGAAGAACATCTGCGAAGGAGGGGAGGAGATGGACAACACCTTCGATGTTCAACAGCGT
GATGAAGATGAACCGAGGAAAGTGGGGCATGGTGGCTGTGGTCGTTACCAACCAAAGATC
CGACGAAACGGGATGGAACTGGTTGCCGAGTGGAAACACGTCAACGAGGATTCGCAGGAG
AAGAAGATCGTTGTCTCAGCTGAGCGTGTTCATGAGATATTTAAGAGAATCTCCGACGAG
GAATCTGACATCCTCGGCATGGACCCAAGGTTTGCTCGTCCCGAATGGATGATTAACACC
GTGATACCTGTTCCCCCACTGTGTGTACGTCCATCCGTCACTATGGGAGGCACCAGTGCG
AGAAGTCAGGATGATTTAACGCACAAGTTGGCTGACATTATTAAAGCCAACCAACAGTTA
AAACGAAATGAACAAAACGGAACTGCCTCCCATATTATATTAGAAGATGTGAAGTTACTA
CAGTACCATGTTGCTACACTGTGTGATAACGATATGCCTGGAGTTCCCAAGGCGTTGCAA
AAATCCGGTCGCCCTTTGAAATCGATCAAACAGCGTCTGAAAGCAAAGGAGGGTAGGATA
AGAGGGAACTTGATGGGTAAGCGGGTGGACTTCTCCGCTCGTACCGTCATTACCCCTGAC
CCCAATCTTAAAATTGATGAGGTTGGTGTGCCACGCTCCATCGCATGCAACCTGACGTAC
CCCGAGATCGTCACCCCATTCAACATCGATCGGATGCAGGAACTTGTTCGACGGGGGAAC
AACCAGTACCCCGGGGCGAAATACATCATCCGAGACGGTGGGGATCGTATCGACCTCCGG
TATCACCCCAAACCCTCCGATCTGCATCTGCAAGTGGGCTACAAGGTTGAGCGGCACATA
AAAGATGGCGACGTGATTGTGTTCAACCGACAGCCCACTCTGCACAAGATGTCCATGATG
GGACATAAAGTCAGAGTTCTGCCCTGGTCTACTTTTAGAATGAATTTATCGGTAACGACG
CCGTACAACGCTGATTTCGATGGAGACGAGATGAACATGCACGTCCCGCAAACCATGGAA
ACGAGAGCCGAGATCCTCCAACTCGCCATGGTGAACCGGATGATCATCACTCCACAGAGC
AATCGGCCGGTCATGGGAATTGTGCAGGACACACTGACCGCCGTCCGCAAAATGACCAAG
CGGGATTCCTTCATTGAAAAGGCCGACTTCATGAACCTGTTAATGTACCTGGGTGATTGG
GACGGGTACCTCCCCCAACCTGCGATCCTCAAACCCAAGCCTCTCTGGACGGGGAAGCAG
ATCTTCTCGCTCATCATCCCCCCTGGGATAAACTGCATCCGGAACCACAGCACCCATCCT
GATGGGGAGGACACTGGACCTTATAAGCACATCTCACCCGGGGATACAAGGGTGCTGGTG
GAGAACGGTATCTTGCTGAGCGGAATAATATGTAAGAAGTCGCTGGGTACGTCTGCGGGG
TCTCTATGTCACGTGGTTGCACTGGAGAAATCTGCCGATGTGTGCCGAGAGTTCTATAGC
AATATACAGACTGTGGTGAACAACTGGTTGATGATTGAGGGACATTCCATCGGTATCGGA
GATACCATTGCCGATGCACAAACCTACCAAGATATTCAAAACCAGATCAGGAAAGCAAAG
CAGGAAGTCATAGAGGTTATAGAGAAAGCTCACAAAGAAGATTTACCCACTCCTGGTAAT
ACTCTGCGGCAGACATTTGAAAATCAAGTCAACAGGATTCTGAACGATGCCCGTGACAAA
ACTGGTTCATCTGCTCAGAAGAGTTTATCAGACTTCAACAACTTTAAAGCTATGGTGGTG
GCTGGCTCTAAAGGGTCCAAAATCAACATCTCCCAGGTTATTGCTGTTGTGGGTCAACAG
AACGTGGAAGGAAAGCGGATCCCATTTGGGTTTCGTCACCGAACCCTGCCCCATTTTATT
AAGGATGATTATGGTCCAGAGGCTCGTGGGTTTGTGGAGAACTCGTACCTTGCTGGGTTG
ACCCCAACCGAGTTTTACTTCCATGCCATGGGAGGTAGAGAGGGTCTCATCGATACTGCT
GTCAAAACTGCCGAAACTGGTTACATCCAGCGTCGACTGGTGAAAGCCATGGAAGCGGTT
ATGGTGCGATACGACGGCACGATACGACAATGTAACGATTACATGATCCAGCTCTGCTAC
GGGGAAGATGGCTTGGCTGGGGAAAAGGTGGAGTTCCAGAACCTCGCCACGCTTAAACCA
AGCCACAAAACCTTCGACAAGAAATTCCGATTCGACTACACCAAGGAGCGATACATGCGT
CGATGTTTGAACGAGGATATCGTCCGAATGATCCAGACCGACGTCTCCATCCAACAGGAG
CTCGATGGCGAGTTCGACCAGTTACAGCAGGACAGGGAAAATATTCGAGCCATTTTTCCA
ACCGGGGACAGCAAGGTTGTATTACCCGTCAACTTGGGCCGATTGATCTGGAACGCACAA
AAGATCTTCCACATCGACCTGAGAGGTCCCGCCAACCTCAACCCGCTCCGAGTGATCGAG
GGAGTCCGGGATCTCAGCAAGAAACTCGTCATCGTGTGCGGGGAGGATCGACTGAGCAAG
GAGGCGCAGAGCAACGCCACTCTGCTCTTCAACGTTCATCTGAGATCCACGTTGTGCTCT
CGGAGAGTTGCAGATGAGTTCCGACTCTCGGCTGAAGCGTTTGAATGGATTCTGGGGGAA
GTTGAAACTAAGTTCCAACAAGCTCAGGTTCACCCTGGTGAGATGGTGGGTGCACTCGCT
GCCCAGTCCCTGGGAGAACCCGCCACCCAGATGACCCTGAACACTTTCCACTACGCCGGT
GTGTCGGCGAAGAACGTAACCCTCGGAGTACCCCGGTTGAAGGAGTTGATCAACGTATCG
AAGAAACCCCGAACCCCCTCACTCACCATATACCTCGTGGGGCCGGCTACCAGGGATGCA
CAGCACTTCCAACCATTACCCACTCACAGGATGGTGTTGTGTCGTCTGGAGCACGCCACC
CTCCGCAAGGTGACGGCGAACACGGCGATCTACTACGATCCGGACCCCATGAGCACAGTC
ATCCAGGAGGACCAGGAATTCGTCAATGTCTATTACGAGATGCCGGACTTTGATGTTACA
AGGATTTCATCGTGGCTGCTCCGTATTGAACTCGACCGGAAGAGAATGACAGACAAGAAA
CTGAGTATGGAGCAAATTGCGGAGAAGATCAGTGCTGGGTTCGGTGACGATTTGAATTGT
ATTTTCAATGACGACAATGCAGAGAAGCTGGTATTACGAATTCGTATTATGAACAGTGAG
GAGCAGAAGACTGATGACGGATCGGATGAGCAAGCTGATAAGATGGAGGATGACGTCTTC
CTCCGATACATTGAAGCTAATATGCTTACCGACATGACTCTACAGGGAATTCCACAAATT
GCAAAGGTATACATGCACTTGCCAAAAGAAGAAAACAAAAAGCGAATCGTTATTACAAAG
GAGGGGGAGTTTAACGCCGTTCAAGATTGGATTTTGGAAACCGACGGCACAGCTCTGATG
AGGATTTTATCGGAGCGCGATATCGACCCGGTCCGAACCACCTCCAACGACATCTGCGAG
ATTTTCGCTGTCCTCGGTATTGAAGCTGTGCGGAAAGCTCTGGAACGGGAAATTAACCAC
GTCATTTCCTTTGACGGTTCCTACGTCAACTACCGTCATCTTGCGCTGCTGTGTGAGGTC
ATGACTTCAAAGGGACATTTGATGGCGATCACGAGACACGGGATAAATCGGCAAGAGACA
GGCGCACTCATGAGATGCTCCTTTGAAGAGACAGTCGATATTTTAATGGAGGCTGCATCA
TCGGCAGAAACTGACCACATGGATGGCGTGTCGGAAAACATAATGTTGGGCCAGTTGGTA
CCGGGTGGAACCGGTTGCTTCGGCTTACTGCTCGATGCAGAGAAGTGCACCTATGCCATG
GAGATACCAACCAACATTGGAGGAGTTGGGGGCACTGGAATGTTCTATGGATCGATGGCT
TCGCCGAGCTCCATGTCTCCCGCCATGACCCCATGGAACAGCGGGGCTGCTACCCCTGGA
TTCATGGGCTCCTTCACCCCCGGAGGTTTTGGCTCCGGAATGACCCCCAGTGCCGCATCG
TTCTCCCCCGCACCCACCGAAAGCGCTGGCTTCTCACCCGGCTACAGCCCTGCATGGAGC
CCTGCTCAGTCCCCTGGGCCCGGCAGCCCATCATCTCCCTATATCCCGTCACCCAAACAC
TCTGCGATGTCACCCAGCTATTCCCCAGTATCCCCAGCTTACGAACCAGGGACTCCGGGC
ACCCCACAAAGCCCCAGTTACACCCCAACAAGTCCAACATATTCACCCACCTCACCTCGG
TATTCCCCAACCAGCCCCAGCTACAGCCCCACATCACCCAGCTATTCACCCACGTCACCC
TCCTACAGCCCCACGTCTCCATCTTATTCACCCACAAGTCCATCCTATTCACCCACCTCT
CCAAGTTACAGTCCTACTTCACCGAGTTACAGCCCCACTTCACCCAGCTACTCCCCAACC
TCACCCTCATATAGCCCCACTTCTCCAAGCTACAGCCCCACATCCCCAAGTTATTCACCC
ACCAGCCCATCTTACTCTCCAACAAGCCCCAGTTACTCTCCAACCTCCCCCAGCTATTCA
CCCACATCACCCAGTTACAGCCCCACATCACCCTCATATAACCCAACCAGTCCATCGTAC
TCCCCAACAAGCCCCTCTTATTCACCTGCAAGCCCCAGTTACTCCCCTACCTCCCCAAGT
TACAGTCCAGCGTCACCCAGCTACTCACCCTCAAGCCCCAAATACTCCCCAGCCAGCCCA
TCTTACAGTCCAGCATCCCCCGAATACAGCCCATCAAGCCCCAAGTACGCCCCGTCATCT
CCATCCTACTCGCCAGCTTCACCCTCCTACAGCCCATCTTCACCCAGTTATTCCCCATCC
AGCCCGAAATATTCTCCGTCAAGCCCCTCATATTCTCCAGCAAGCCCTTCATACTCACCC
ACCAGCCCCTCATATTCACCTACAAGCCCCTCGTACTCTCCAACGAGCCCCGGGTATTCA
CCTTCCTCACCCAGCTACTCCCCATCAAGGTATTCCCCAAGCAGCCCCACATATTCTCCA
ACCAGTCCGTCCTACTCACCTGCGAGCCCCCAATATACCCCCACAAGCCCCACATACACT
CCGGGCGGGGACCTATCACCTGCTTCACCAAGCTACAGCCCCTCATCACCAGGAGCAGAG
AGCCCAACGAGTCCATCATACAGCCCATCCAGTCCATCCTACAGCCCTGCAAGCCCAATG
TACTCACCCACCAGTCCTGGCTACAGTCCTTCAAGTCCAGGCTATAGCCCGACATCTCCC
AGCTACACACCTAGCACTCCAGGGGGTGGAGTC

InterProScan

Pfam	RNA_pol_Rpb1_1 (IPR007080) - T[7-344] 2.7E-107
SMART	RNA_pol_N (IPR006592) - T[235-539] 3.3E-198
Pfam	RNA_pol_asu (IPR000722) - T[346-511] 4.6E-75
Pfam	RNA_pol_Rpb1_3 (IPR007066) - T[515-682] 2.1E-50
Gene3D	Rpb1_funnel_sf (IPR038120) - T[677-821] 8.3E-52
Pfam	RNA_pol_Rpb1_4 (IPR007083) - T[712-812] 1.5E-35
Pfam	RNA_pol_Rpb1_5 (IPR007081) - T[819-1422] 4.8E-97
Pfam	RNA_pol_Rpb1_6 (IPR007075) - T[885-1068] 7.5E-67
Gene3D	RNA_pol_Rpb1_7_sf (IPR038593) - T[1159-1296] 4.7E-56
Pfam	RNA_pol_Rpb1_7 (IPR007073) - T[1159-1295] 1.7E-55
Pfam	RNA_pol_II_repeat_euk (IPR000684) - T[1588-1600] 1.9 - T[1602-1614] 7.5 - T[1615-1628] 0.11 - T[1629-1642] 0.4 - T[1643-1656] 0.47 - T[1657-1670] 0.53 - T[1664-1677] 0.61 - T[1671-1684] 0.56 - T[1678-1691] 0.65 - T[1685-1698] 0.61 - T[1692-1705] 0.71 - T[1699-1712] 0.65 - T[1706-1719] 0.72 - T[1713-1726] 0.62 - T[1720-1733] 0.7 - T[1727-1740] 2.2 - T[1734-1747] 1.1 - T[1741-1754] 2.1 - T[1748-1761] 1.3 - T[1755-1768] 2.2 - T[1762-1775] 0.63 - T[1769-1782] 8.2 - T[1776-1789] 1.3 - T[1804-1817] 12.0 - T[1811-1824] 10.0 - T[1832-1845] 1.3 - T[1839-1852] 0.7 - T[1846-1859] 0.062 - T[1853-1866] 0.32 - T[1886-1899] 0.045 - T[1935-1948] 0.005 - T[1942-1955] 0.036 - T[1949-1962] 0.84
ProSitePatterns	RNA_pol_II_repeat_euk (IPR000684) - T[1607-1613] . - T[1621-1627] . - T[1628-1634] . - T[1642-1648] . - T[1649-1655] . - T[1656-1662] . - T[1663-1669] . - T[1677-1683] . - T[1684-1690] . - T[1691-1697] . - T[1698-1704] . - T[1712-1718] . - T[1719-1725] . - T[1726-1732] . - T[1754-1760] . - T[1768-1774] . - T[1838-1844] . - T[1845-1851] . - T[1859-1865] . - T[1878-1884] . - T[1892-1898] . - T[1955-1961] .