Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,681

>Cisavi.CG.ENS81.R67.1507499-1523609.14377.p
DCPGHFGHIELARPVFHVGFLTKTIKILRCVCYYCSRLLVEKVCGHNYKYTMSEKKTRKN
KDNVVGHGGCGRYQPKIRRNGMELVAEWKHVNEDSQEKKIVVSAERVHEIFKRISDEESD
ILGMDPRFARPEWMINTVIPVPPLCVRPSVTMGGTSARSQDDLTHKLADIIKANQQLKRN
EQNGTASHIILEDVKLLQYHVATLCDNDMPGVPKALQKSGRPLKSIKQRLKAKEGRIRGN
LMGKRVDFSARTVITPDPNLKIDEVGVPRSIACNLTYPEIVTPFNIDRMQELVRRGNNQY
PGAKYIIRDGGDRIDLRYHPKPSDLHLQVGYKVERHIKDGDVIVFNRQPTLHKMSMMGHK
VRVLPWSTFRMNLSVTTPYNADFDGDEMNMHVPQTMETRAEILQLAMVNRMIITPQSNRP
VMGIVQDTLTAVRKMTKRDSFIEKADFMNLLMYLGDWDGYLPQPAILKPKPLWTGKQIFS
LIIPPGINCIRNHSTHPDGEDTGPYKHISPGDTRVLVENGILLSGIICKKSLGTSAGSLC
HVVALEKSADVCREFYSNIQTVVNNWLMIEGHSIGIGDTIADAQTYQDIQNQIRKAKQEV
IERKLTKKIYNPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSDFNNFKAMVVAGSK
GSKINISQVIAVVGQQNVEGKRIPFGFRHRTLPHFIKDDYGPEARGFVENSYLAGLTPTE
FYFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEAVMVRYDGTIRQCNDYMIQLCYGEDG
LAGEKVEFQNLATLKPSHKTFDKKFRFDYTKERYMRRCLNEDIVRMIQTDVSIQQELDGE
FDQLQQDRENIRAIFPTGDSKVVLPVNLGRLIWNAQKIFHIDLRGPANLNPLRVIEGVRD
LSKKLVIVCGEDRLSKEAQSNATLLFNVHLRSTLCSRRVADEFRLSAEAFEWILGEVETK
FQQAQVHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINVSKKPR
TPSLTIYLVGPATRDAQRCKVRDLNHATLRKVTANTAIYYDPDPMSTVIQEDQEFVNVYY
EMPDFDVTRISSWLLRIELDRKRMTDKKLSMEQIAEKISAGFGDDLNCIFNDDNAEKLVL
RIRIMNRSVSLQLKTDDGSDEQADKMEDDVFLRYIEANMLTDMTLQGIPQIAKVYMHLPK
EENKKRIVITKEGEFNAVQDWILETDGTALMRILSERDIDPVRTTSNDICEIFAVLGIEA
VRKALEREINHVISFDGSYVNYRHLALLCEVMTSKGHLMAITRHGINRQETGALMRCSFE
ETVDILMEAASSAETDHMDGVSENIMLGQLVPGGTGCFGLLLDAEKCTYAMEIPTNIGGV
GGSSMSPAMTPWNSGAATPGFMGSFTPGALASHPATALHGALLSPLGPGSPSSPYIPSPK
HSAMSPSYSPVSPAYEPGTPGTPQSPSYTPTSPTYSPTSPRYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYNPTSPSYSPTSPSYSPASPSYSPTSP
SYSPASPSYSPSSPKYSPASPSYSPASPEYSPSSPKYAPSSPSYSPASPSYSPSSPSYSP
S

Nucleotide sequence

Length: 5,043

>Cisavi.CG.ENS81.R67.1507499-1523609.14377.t
GACTGTCCCGGACACTTCGGACATATTGAACTTGCACGACCCGTGTTTCATGTTGGATTT
CTTACAAAAACCATCAAAATACTTCGTTGTGTGTGCTACTACTGCTCGAGGCTACTTGTG
GAAAAGGTGTGTGGTCATAATTATAAATATACAATGAGTGAGAAAAAAACAAGGAAAAAT
AAGGATAATGTAGTGGGGCATGGTGGCTGTGGTCGTTACCAACCAAAGATCCGACGAAAC
GGGATGGAACTGGTTGCCGAGTGGAAACACGTCAACGAGGATTCGCAGGAGAAGAAGATC
GTTGTCTCAGCTGAGCGTGTTCATGAGATATTTAAGAGAATCTCCGACGAGGAATCTGAC
ATCCTCGGCATGGACCCAAGGTTTGCTCGTCCCGAATGGATGATTAACACCGTGATACCT
GTTCCCCCACTGTGTGTACGTCCATCCGTCACTATGGGAGGCACCAGTGCGAGAAGTCAG
GATGATTTAACGCACAAGTTGGCTGACATTATTAAAGCCAACCAACAGTTAAAACGAAAT
GAACAAAACGGAACTGCCTCCCATATTATATTAGAAGATGTGAAGTTACTACAGTACCAT
GTTGCTACACTGTGTGATAACGATATGCCTGGAGTTCCCAAGGCGTTGCAAAAATCCGGT
CGCCCTTTGAAATCGATCAAACAGCGTCTGAAAGCAAAGGAGGGTAGGATAAGAGGGAAC
TTGATGGGTAAGCGGGTGGACTTCTCCGCTCGTACCGTCATTACCCCTGACCCCAATCTT
AAAATTGATGAGGTTGGTGTGCCACGCTCCATCGCATGCAACCTGACGTACCCCGAGATC
GTCACCCCATTCAACATCGATCGGATGCAGGAACTTGTTCGACGGGGGAACAACCAGTAC
CCCGGGGCGAAATACATCATCCGAGACGGTGGGGATCGTATCGACCTCCGGTATCACCCC
AAACCCTCCGATCTGCATCTGCAAGTGGGCTACAAGGTTGAGCGGCACATAAAAGATGGC
GACGTGATTGTGTTCAACCGACAGCCCACTCTGCACAAGATGTCCATGATGGGACATAAA
GTCAGAGTTCTGCCCTGGTCTACTTTTAGAATGAATTTATCGGTAACGACGCCGTACAAC
GCTGATTTCGATGGAGACGAGATGAACATGCACGTCCCGCAAACCATGGAAACGAGAGCC
GAGATCCTCCAACTCGCCATGGTGAACCGGATGATCATCACTCCACAGAGCAATCGGCCG
GTCATGGGAATTGTGCAGGACACACTGACCGCCGTCCGCAAAATGACCAAGCGGGATTCC
TTCATTGAAAAGGCCGACTTCATGAACCTGTTAATGTACCTGGGTGATTGGGACGGGTAC
CTCCCCCAACCTGCGATCCTCAAACCCAAGCCTCTCTGGACGGGGAAGCAGATCTTCTCG
CTCATCATCCCCCCTGGGATAAACTGCATCCGGAACCACAGCACCCATCCTGATGGGGAG
GACACTGGACCTTATAAGCACATCTCACCCGGGGATACAAGGGTGCTGGTGGAGAACGGT
ATCTTGCTGAGCGGAATAATATGTAAGAAGTCGCTGGGTACGTCTGCGGGGTCTCTATGT
CACGTGGTTGCACTGGAGAAATCTGCCGATGTGTGCCGAGAGTTCTATAGCAATATACAG
ACTGTGGTGAACAACTGGTTGATGATTGAGGGACATTCCATCGGTATCGGAGATACCATT
GCCGATGCACAAACCTACCAAGATATTCAAAACCAGATCAGGAAAGCAAAGCAGGAAGTC
ATAGAGAGAAAGCTCACAAAGAAGATTTACAACCCCACTCCTGGTAATACTCTGCGGCAG
ACATTTGAAAATCAAGTCAACAGGATTCTGAACGATGCCCGTGACAAAACTGGTTCATCT
GCTCAGAAGAGTTTATCAGACTTCAACAACTTTAAAGCTATGGTGGTGGCTGGCTCTAAA
GGGTCCAAAATCAACATCTCCCAGGTTATTGCTGTTGTGGGTCAACAGAACGTGGAAGGA
AAGCGGATCCCATTTGGGTTTCGTCACCGAACCCTGCCCCATTTTATTAAGGATGATTAT
GGTCCAGAGGCTCGTGGGTTTGTGGAGAACTCGTACCTTGCTGGGTTGACCCCAACCGAG
TTTTACTTCCATGCCATGGGAGGTAGAGAGGGTCTCATCGATACTGCTGTCAAAACTGCC
GAAACTGGTTACATCCAGCGTCGACTGGTGAAAGCCATGGAAGCGGTTATGGTGCGATAC
GACGGCACGATACGACAATGTAACGATTACATGATCCAGCTCTGCTACGGGGAAGATGGC
TTGGCTGGGGAAAAGGTGGAGTTCCAGAACCTCGCCACGCTTAAACCAAGCCACAAAACC
TTCGACAAGAAATTCCGATTCGACTACACCAAGGAGCGATACATGCGTCGATGTTTGAAC
GAGGATATCGTCCGAATGATCCAGACCGACGTCTCCATCCAACAGGAGCTCGATGGCGAG
TTCGACCAGTTACAGCAGGACAGGGAAAATATTCGAGCCATTTTTCCAACCGGGGACAGC
AAGGTTGTATTACCCGTCAACTTGGGCCGATTGATCTGGAACGCACAAAAGATCTTCCAC
ATCGACCTGAGAGGTCCCGCCAACCTCAACCCGCTCCGAGTGATCGAGGGAGTCCGGGAT
CTCAGCAAGAAACTCGTCATCGTGTGCGGGGAGGATCGACTGAGCAAGGAGGCGCAGAGC
AACGCCACTCTGCTCTTCAACGTTCATCTGAGATCCACGTTGTGCTCTCGGAGAGTTGCA
GATGAGTTCCGACTCTCGGCTGAAGCGTTTGAATGGATTCTGGGGGAAGTTGAAACTAAG
TTCCAACAAGCTCAGGTTCACCCTGGTGAGATGGTGGGTGCACTCGCTGCCCAGTCCCTG
GGAGAACCCGCCACCCAGATGACCCTGAACACTTTCCACTACGCCGGTGTGTCGGCGAAG
AACGTAACCCTCGGAGTACCCCGGTTGAAGGAGTTGATCAACGTATCGAAGAAACCCCGA
ACCCCCTCACTCACCATATACCTCGTGGGGCCGGCTACCAGGGATGCACAGCGTTGCAAG
GTCCGGGATTTAAATCACGCCACCCTCCGCAAGGTGACGGCGAACACGGCGATCTACTAC
GATCCGGACCCCATGAGCACAGTCATCCAGGAGGACCAGGAATTCGTCAATGTCTATTAC
GAGATGCCGGACTTTGATGTTACAAGGATTTCATCGTGGCTGCTCCGTATTGAACTCGAC
CGGAAGAGAATGACAGACAAGAAACTGAGTATGGAGCAAATTGCGGAGAAGATCAGTGCT
GGGTTCGGTGACGATTTGAATTGTATTTTCAATGACGACAATGCAGAGAAGCTGGTATTA
CGAATTCGTATTATGAACAGGTCAGTATCGCTGCAATTAAAGACTGATGACGGATCGGAT
GAGCAAGCTGATAAGATGGAGGATGACGTCTTCCTCCGATACATTGAAGCTAATATGCTT
ACCGACATGACTCTACAGGGAATTCCACAAATTGCAAAGGTATACATGCACTTGCCAAAA
GAAGAAAACAAAAAGCGAATCGTTATTACAAAGGAGGGGGAGTTTAACGCCGTTCAAGAT
TGGATTTTGGAAACCGACGGCACAGCTCTGATGAGGATTTTATCGGAGCGCGATATCGAC
CCGGTCCGAACCACCTCCAACGACATCTGCGAGATTTTCGCTGTCCTCGGTATTGAAGCT
GTGCGGAAAGCTCTGGAACGGGAAATTAACCACGTCATTTCCTTTGACGGTTCCTACGTC
AACTACCGTCATCTTGCGCTGCTGTGTGAGGTCATGACTTCAAAGGGACATTTGATGGCG
ATCACGAGACACGGGATAAATCGGCAAGAGACAGGCGCACTCATGAGATGCTCCTTTGAA
GAGACAGTCGATATTTTAATGGAGGCTGCATCATCGGCAGAAACTGACCACATGGATGGC
GTGTCGGAAAACATAATGTTGGGCCAGTTGGTACCGGGTGGAACCGGTTGCTTCGGCTTA
CTGCTCGATGCAGAGAAGTGCACCTATGCCATGGAGATACCAACCAACATTGGAGGAGTT
GGGGGTAGCTCCATGTCTCCCGCCATGACCCCATGGAACAGCGGGGCTGCTACCCCTGGA
TTCATGGGCTCCTTCACCCCCGGAGCGCTGGCTTCTCACCCGGCTACAGCCCTGCATGGA
GCCCTGCTCAGTCCCCTGGGCCCCGGCAGCCCATCATCTCCCTATATCCCGTCACCCAAA
CACTCTGCGATGTCACCCAGCTATTCCCCAGTATCCCCAGCTTACGAACCAGGGACTCCG
GGCACCCCACAAAGCCCCAGTTACACCCCAACAAGTCCAACATATTCACCCACCTCACCT
CGGTATTCCCCAACCAGCCCCAGCTACAGCCCCACATCACCCAGCTATTCACCCACGTCA
CCCTCCTACAGCCCCACGTCTCCATCTTATTCACCCACAAGTCCATCCTATTCACCCACC
TCTCCAAGTTACAGTCCTACTTCACCGAGTTACAGCCCCACTTCACCCAGCTACTCCCCA
ACCTCACCCTCATATAGCCCCACTTCTCCAAGCTACAGCCCCACATCCCCAAGTTATTCA
CCCACCAGCCCATCTTACTCTCCAACAAGCCCCAGTTACTCTCCAACCTCCCCCAGCTAT
TCACCCACATCACCCAGTTACAGCCCCACATCACCCTCATATAACCCAACCAGTCCATCG
TACTCCCCAACAAGCCCCTCTTATTCACCTGCAAGCCCCAGTTACTCCCCTACCTCCCCA
AGTTACAGTCCAGCGTCACCCAGCTACTCACCCTCAAGCCCCAAATACTCCCCAGCCAGC
CCATCTTACAGTCCAGCATCCCCCGAATACAGCCCATCAAGCCCCAAGTACGCCCCGTCA
TCTCCATCCTACTCGCCAGCTTCACCCTCCTACAGCCCATCTTCACCCAGTTATTCCCCA
TCC

InterProScan

Pfam	RNA_pol_Rpb1_1 (IPR007080) - T[1-241] 9.8E-82
SMART	RNA_pol_N (IPR006592) - T[132-436] 3.3E-198
Pfam	RNA_pol_asu (IPR000722) - T[243-408] 3.7E-75
Pfam	RNA_pol_Rpb1_3 (IPR007066) - T[412-579] 1.7E-50
Gene3D	Rpb1_funnel_sf (IPR038120) - T[574-717] 1.1E-49
Pfam	RNA_pol_Rpb1_4 (IPR007083) - T[607-708] 6.8E-36
Pfam	RNA_pol_Rpb1_5 (IPR007081) - T[715-1313] 5.8E-98
Pfam	RNA_pol_Rpb1_6 (IPR007075) - T[781-964] 6.1E-67
Pfam	RNA_pol_Rpb1_7 (IPR007073) - T[1047-1186] 6.3E-55
Gene3D	RNA_pol_Rpb1_7_sf (IPR038593) - T[1047-1187] 9.5E-55
Pfam	RNA_pol_II_repeat_euk (IPR000684) - T[1449-1461] 1.3 - T[1463-1475] 6.3 - T[1476-1489] 0.02 - T[1490-1503] 0.41 - T[1497-1510] 0.52 - T[1504-1517] 0.46 - T[1511-1524] 0.58 - T[1518-1531] 0.52 - T[1525-1538] 0.59 - T[1532-1545] 0.51 - T[1539-1552] 0.55 - T[1546-1559] 0.52 - T[1553-1566] 0.58 - T[1560-1573] 0.48 - T[1567-1580] 0.56 - T[1581-1594] 0.51 - T[1595-1608] 1.0 - T[1609-1622] 0.83 - T[1623-1636] 1.4 - T[1637-1650] 0.68
ProSitePatterns	RNA_pol_II_repeat_euk (IPR000684) - T[1468-1474] . - T[1482-1488] . - T[1489-1495] . - T[1503-1509] . - T[1510-1516] . - T[1517-1523] . - T[1524-1530] . - T[1538-1544] . - T[1545-1551] . - T[1552-1558] . - T[1559-1565] . - T[1573-1579] . - T[1580-1586] . - T[1587-1593] . - T[1650-1656] . - T[1671-1677] .