- Transcript 'Boleac.CG.SB_v3.S26....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S26.g06172.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
S26 [116,812 / 119,531]
Amino acid sequence
Length: 394
>Boleac.CG.SB_v3.S26.g06172.01.p
MSTLVSGGYAMPERLHKDFSASFYSRETSNYSLRAAWLGFSETVSPLSNQSLAGARSMSR
PMNLTSRRNSTSSVSSNSSTMNRMNLNPLTTMATAIPESPTASISAALSSIPINPEDKFR
GRAYSEGASSLSSGSDSSVQTQQQPVASSRYKTELCRPFEENGKCKYGDKCQFAHGKQEL
RHLPRHPKYKTELCRTFHTSGFCPYGPRCHFIHNQDDSNIRNNVSRPNVSAIGQQSPKPP
THGVPVAIPTSHASERNHFSHRPAHLNLLAKPMSNGATFGSNIGFNPVPASPPYFDMGCS
TAMSPNSPTSGHNGSAFIFPNSAVGLIPQQPQNDRAFDMLHSLRSHRYSETTVNDDNSAF
DRLPPTPPDSDRESMAGSPPEKQRLPIFRCLSQS
Nucleotide sequence
Length: 2,557
>Boleac.CG.SB_v3.S26.g06172.01.t
AGTGAAGCAAACATTGCGTATACTGTGTAATAACGTATCTGGGCCATTCGCCTTGCAAAT
TGTAAAGAAGCAAAAATGTCNACTTTGGTATCCGGAGGATATGCCATGCCTGAAAGACTC
CATAAAGATTTCTCGGCAAGTTTTTATAGCCGGGAAACCAGCAATTACAGTCTTCGAGCT
GCTTGGCTCGGGTTCAGCGAGACCGTTTCGCCGCTCTCAAATCAATCGTTGGCCGGCGCA
AGGTCGATGTCAAGACCGATGAACCTAACCAGCAGGCGGAACTCAACTTCTTCAGTATCT
TCAAATTCTTCGACAATGAATCGTATGAACTTGAATCCATTAACGACAATGGCTACTGCA
ATACCTGAATCACCCACTGCATCAATATCAGCTGCTCTAAGTTCAATCCCCATCAATCCG
GAGGACAAATTTCGTGGACGAGCTTACAGCGAAGGGGCCAGCTCTCTCAGCTCTGGCTCA
GACTCATCCGTGCAAACGCAACAGCAACCTGTCGCATCTAGTAGATACAAGACTGAGCTT
TGCAGGCCATTTGAAGAAAATGGTAAATGCAAATACGGCGATAAATGCCAGTTTGCCCAT
GGAAAGCAGGAATTAAGGCATTTGCCAAGACATCCCAAGTACAAGACAGAGCTATGTCGG
ACTTTTCACACAAGTGGCTTTTGCCCATATGGGCCCAGGTGTCATTTTATTCATAATCAA
GACGACTCAAACATTCGCAACAACGTGTCTCGCCCAAATGTATCGGCGATCGGTCAGCAG
TCACCGAAGCCTCCTACACATGGAGTACCGGTCGCGATTCCAACGTCGCATGCTTCGGAG
CGCAACCACTTCAGCCACCGACCGGCCCATCTGAATCTATTAGCAAAACCAATGAGCAAT
GGAGCTACTTTTGGATCGAATATTGGCTTTAATCCAGTACCAGCTTCACCTCCGTACTTC
GACATGGGATGTTCAACTGCCATGTCTCCGAATTCACCCACCTCGGGCCACAACGGTTCT
GCATTCATTTTTCCTAACAGTGCGGTTGGCTTGATTCCACAACAACCGCAAAACGACCGG
GCATTTGACATGCTACACTCTCTACGCTCTCACAGATATTCTGAAACCACCGTGAACGAC
GATAATAGCGCTTTTGACAGACTACCACCAACACCACCCGATTCAGACCGCGAGTCGATG
GCAGGTTCCCCACCTGAAAAGCAACGCCTACCCATTTTTCGCTGCCTTTCTCAGTCATAA
AACATTGTTCAAGCTAGCCACTGTTATATTGAGAAGGTGCAGTCAGCGATTCGGTTTGCG
GATCGGGATGTCGGCACGTTTGTTCGAGCTTCAACATTTGTCACTAACTGTTAAAGAGGG
AACGATTATTTTTTGTTCTTATACTTGATCTCAAGGGAATTGCCGCACAGTGCATCGGAA
CTGTAAGTGCCTTTCTTGAAATTTTTTCCATGCTTAAGTTATTGTTATTGTGATTCTGTA
GTATATTACTTTCTGATGCACTTTGTCACCTGGATGTGATTGAATACTAAAGGTTCTTCG
CCAGGTTGTGTATGATTCTGCAAAACTTGTCAACATTTCCACTTCCTTGCTAAGCGGGGA
CGCGTTTTGCCAACATAACTTGTGATTTCGAACACATTGGTTTATTCGGATGTTCATCAG
TTCACATATATCTTATATAACGACTAATTTATAGTACTTTTATACATGCAAACAAAGTAC
CATGTTGTAGCTGCTCTTGACTGCCGAAAGCCTTGTCCGCCGCGCCGGATAAGGTTTCCT
TTTATGATTGCCGTTGAAACCGATGTGCGGTTGGAATTGAAATGCTGCTATAAGTCCATC
CCTTCAACGTTTTGTCGACTCTCATTTTTGCGTTGGTGTCGTTGTGTTGGCCATACGTCA
GAGTAGAGTGGCGTTTAGATTTATGACCACTGTGTTCAAACATGAGTATGTTATCGTGCG
ATGCGGACCAAGCGGTGCTTTACTCCACTCAATAGCCCGCTAAACTGCTGGGACCACGGT
AATCGATTACTTGCAAGCCCGACTTTTCGGGAATTTCGCGCTAAATGCACTTAAATNTGG
CCACAGAACACGTATCGGACGTCTGATTCTTTAAGCAAGCTCCCAGATTACCGTCCCTAT
GTAATGCACTGTAATCATCTGTTTCAATCGACCAGAATCGGGGCTGCCTTTGTGTTCATA
TCATTTGCTGTGGGCTTGGTCTTGTGTTGTTAGTGTATGCGGCCAAATTGGTGACGAAAG
GTGTCGGGGAACTTGCCCCTATAACTGATGGCCTCCGACAATTATTTATATACGTCTTAA
TGCTAAATTATTGCTATTTCGCTTCGAAAACTGCACCACTAATCTAACGTATAGTGTTCG
TTGGCCGACATGATAAGTTGTGTATTCTCGCAATTTGTTCAACGATTTTCACTCCAAGTG
TAAGAGATATTACTGTTCACTTTCAACATTATATTTGCGACCTATTTATTGTCATTACCT
TTCATTAAAAATACCACTACTTGATGTAGAACATGAA
| Pfam |
Tis11B_N (IPR007635) - T[51-129] 6.9E-4 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[149-182] 3.53E-10 - T[185-217] 2.49E-10 |
| SMART |
Znf_CCCH (IPR000571) - T[150-177] 3.1E-9 - T[188-215] 8.3E-9 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[150-178] 17.262 - T[188-216] 15.92 |
| Pfam |
Znf_CCCH (IPR000571) - T[151-177] 5.4E-11 - T[189-215] 7.9E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 68.868 % | 158 | 5.28E-45 |
| TISD_HUMAN | 62.963 % | 147 | 9.95E-40 |
| TTP_HUMAN | 53.535 % | 112 | 2.83E-28 |