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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'
  2. Transcript 'Cisavi.CG.ENS81.R76....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R76.10774-23190.07268.t

Possible name(s)

VPS26A; VPS26B; VPS26C

Location

R76 [10,773 / 23,190]

Sequences

Amino acid sequence

Length: 294

>Cisavi.CG.ENS81.R76.10774-23190.07268.p
KMATVEIRLKRPTKVYHEGETVCGLIEVESKTAIAHQSISLVAEGIAALTLSAKSVGRLE
SMYNNMKPVPLFNYSTELARQGKLAAGKTTVPFEFVLKPRGSIKSLLETYHGVFISVQYN
IKCLIKRPLLNKDLSKEVEFLIEYKSGDKASHKPLNFTICPKNENSKTDMQRFSVRGRLD
SCVCCITKPFMGELIVERSENPIRSIELQLMRVETVGSAEGFAKEATEIQNIEIGCGDVC
RGLAIPIYMVFPRMFSCPTVDTPNFKIEFEVNIVIAFEGGRTIVEQFPIKLTRF

Nucleotide sequence

Length: 986

>Cisavi.CG.ENS81.R76.10774-23190.07268.t
TAAAATAAAAATTTAAAAAACTGTGCATCTTTTAATAAAAATGGCAACTGTTGAAATTAG
GTTGAAGCGTCCAACAAAAGTGTACCATGAAGGCGAAACCGTGTGCGGGTTGATAGAAGT
GGAGAGCAAGACTGCAATCGCTCATCAGTCGATTAGTTTGGTTGCAGAAGGCATCGCAGC
TTTAACGTTGAGTGCGAAGAGTGTTGGAAGATTAGAGTCGATGTACAACAACATGAAACC
TGTTCCGCTCTTCAATTATTCAACTGAACTTGCAAGACAGGGAAAATTGGCAGCAGGTAA
AACAACGGTTCCATTCGAGTTCGTGTTGAAACCGCGTGGAAGTATCAAGTCCCTGCTTGA
AACTTACCATGGTGTCTTCATATCTGTGCAGTACAACATAAAGTGCTTGATAAAACGTCC
ACTACTCAACAAAGATCTTTCAAAAGAAGTTGAATTTCTTATTGAATACAAGAGCGGTGA
CAAGGCTTCACACAAGCCACTCAACTTTACAATCTGCCCGAAAAACGAAAATTCGAAAAC
GGACATGCAGCGATTTTCCGTCAGAGGACGCCTCGACAGTTGTGTCTGTTGCATCACAAA
GCCATTTATGGGGGAATTGATCGTGGAACGATCGGAGAATCCGATTCGGTCGATCGAACT
GCAGTTGATGAGAGTGGAGACTGTGGGAAGTGCGGAAGGATTCGCGAAAGAAGCCACCGA
GATCCAGAACATTGAGATTGGTTGCGGGGATGTGTGTAGGGGGCTCGCGATACCCATTTA
CATGGTGTTTCCCCGAATGTTCTCCTGCCCCACTGTCGACACCCCGAATTTTAAGATCGA
ATTCGAAGTGAACATCGTAATCGCATTCGAGGGTGGAAGGACAATCGTGGAGCAGTTCCC
GATCAAATTGACGAGGTTTTGAAGCCAGAATGACAGGCCGACTATAGAACTAACGATGTG
GGTTCCACATAATTACCCTCGCATCA

InterProScan

Gene3D
Arrestin_C (IPR014752) - T[1-146] 5.8E-27 - T[178-294] 3.1E-11
PANTHER
Vps26-related (IPR028934) - T[2-293] 2.3E-111
SUPERFAMILY
Ig_E-set (IPR014756) - T[4-142] 1.33E-6
Pfam
Vps26-related (IPR028934) - T[12-276] 6.1E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 51.195 % 312 5.55E-107