Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R76.10774-23190.07269.t

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

Cisavi.CG.ENS81.R76.10774-23190

Location

R76 [10,837 / 19,321]

Sequences

Amino acid sequence

Length: 253

>Cisavi.CG.ENS81.R76.10774-23190.07269.p
AEGIAALTLSAKSVGRLESMYNNMKPVPLFNYSTELARQGKLAAGKTTVPFEFVLKPRGS
IKSLLETYHGVFISVQYNIKCLIKRPLLNKDLSKEVEFLIEYKSGDKASHKPLNFTICPK
NENSSFKTKLFSIFRQRTPRQLCLLHHKAIYGGIDRGTIGESDSVDRTAVDESGDCGKCG
FAKEATEIQNIEIGCGDVCRGLAIPIYMVFPRMFSCPTVDTPNFKIEFEVNIVIAFEGGR
TIVEQFPIKLTRF

Nucleotide sequence

Length: 762

>Cisavi.CG.ENS81.R76.10774-23190.07269.t
GCAGAAGGCATCGCAGCTTTAACGTTGAGTGCGAAGAGTGTTGGAAGATTAGAGTCGATG
TACAACAACATGAAACCTGTTCCGCTCTTCAATTATTCAACTGAACTTGCAAGACAGGGA
AAATTGGCAGCAGGTAAAACAACGGTTCCATTCGAGTTCGTGTTGAAACCGCGTGGAAGT
ATCAAGTCCCTGCTTGAAACTTACCATGGTGTCTTCATATCTGTGCAGTACAACATAAAG
TGCTTGATAAAACGTCCACTACTCAACAAAGATCTTTCAAAAGAAGTTGAATTTCTTATT
GAATACAAGAGCGGTGACAAGGCTTCACACAAGCCACTCAACTTTACAATCTGCCCGAAA
AACGAAAATTCGAGCTTTAAAACAAAACTATTCTCGATTTTCCGTCAGAGGACGCCTCGA
CAGTTGTGTCTGTTGCATCACAAAGCCATTTATGGGGGAATTGATCGTGGAACGATCGGA
GAATCCGATTCGGTCGATCGAACTGCAGTTGATGAGAGTGGAGACTGTGGGAAGTGCGGA
TTCGCGAAAGAAGCCACCGAGATCCAGAACATTGAGATTGGTTGCGGGGATGTGTGTAGG
GGGCTCGCGATACCCATTTACATGGTGTTTCCCCGAATGTTCTCCTGCCCCACTGTCGAC
ACCCCGAATTTTAAGATCGAATTCGAAGTGAACATCGTAATCGCATTCGAGGGTGGAAGG
ACAATCGTGGAGCAGTTCCCGATCAAATTGACGAGGTTTTGA

InterProScan

PANTHER	Vps26-related (IPR028934) - T[1-252] 5.4E-69
Gene3D	Arrestin_C (IPR014752) - T[2-104] 2.7E-18
Pfam	Vps26-related (IPR028934) - T[12-123] 5.2E-14 - T[179-235] 3.6E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DSCR3_HUMAN	43.75 %	207	3.66E-66