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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'
  2. Transcript 'Cisavi.CG.ENS81.R76....'
  3. Clone 'cima879114'
  4. Clone 'ma339b11'
  5. Transcript 'Cisavi.CG.ENS81.R76....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R76.10774-23190.07269.t

Possible name(s)

VPS26A; VPS26B; VPS26C

Location

R76 [10,837 / 19,321]

Sequences

Amino acid sequence

Length: 253

>Cisavi.CG.ENS81.R76.10774-23190.07269.p
AEGIAALTLSAKSVGRLESMYNNMKPVPLFNYSTELARQGKLAAGKTTVPFEFVLKPRGS
IKSLLETYHGVFISVQYNIKCLIKRPLLNKDLSKEVEFLIEYKSGDKASHKPLNFTICPK
NENSSFKTKLFSIFRQRTPRQLCLLHHKAIYGGIDRGTIGESDSVDRTAVDESGDCGKCG
FAKEATEIQNIEIGCGDVCRGLAIPIYMVFPRMFSCPTVDTPNFKIEFEVNIVIAFEGGR
TIVEQFPIKLTRF

Nucleotide sequence

Length: 762

>Cisavi.CG.ENS81.R76.10774-23190.07269.t
GCAGAAGGCATCGCAGCTTTAACGTTGAGTGCGAAGAGTGTTGGAAGATTAGAGTCGATG
TACAACAACATGAAACCTGTTCCGCTCTTCAATTATTCAACTGAACTTGCAAGACAGGGA
AAATTGGCAGCAGGTAAAACAACGGTTCCATTCGAGTTCGTGTTGAAACCGCGTGGAAGT
ATCAAGTCCCTGCTTGAAACTTACCATGGTGTCTTCATATCTGTGCAGTACAACATAAAG
TGCTTGATAAAACGTCCACTACTCAACAAAGATCTTTCAAAAGAAGTTGAATTTCTTATT
GAATACAAGAGCGGTGACAAGGCTTCACACAAGCCACTCAACTTTACAATCTGCCCGAAA
AACGAAAATTCGAGCTTTAAAACAAAACTATTCTCGATTTTCCGTCAGAGGACGCCTCGA
CAGTTGTGTCTGTTGCATCACAAAGCCATTTATGGGGGAATTGATCGTGGAACGATCGGA
GAATCCGATTCGGTCGATCGAACTGCAGTTGATGAGAGTGGAGACTGTGGGAAGTGCGGA
TTCGCGAAAGAAGCCACCGAGATCCAGAACATTGAGATTGGTTGCGGGGATGTGTGTAGG
GGGCTCGCGATACCCATTTACATGGTGTTTCCCCGAATGTTCTCCTGCCCCACTGTCGAC
ACCCCGAATTTTAAGATCGAATTCGAAGTGAACATCGTAATCGCATTCGAGGGTGGAAGG
ACAATCGTGGAGCAGTTCCCGATCAAATTGACGAGGTTTTGA

InterProScan

PANTHER
Vps26-related (IPR028934) - T[1-252] 5.4E-69
Gene3D
Arrestin_C (IPR014752) - T[2-104] 2.7E-18
Pfam
Vps26-related (IPR028934) - T[12-123] 5.2E-14 - T[179-235] 3.6E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 43.75 % 207 3.66E-66