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TRANSCRIPT CARD

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  1. EST 'FK176363.1'
  2. Transcript 'KH2012:KH.C3.469.v1....'
  3. Transcript 'Phfumi.CG.MTP2014.S2...'
  4. Transcript 'Cisavi.CG.ENS81.R76....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R76.1995169-2024065.13973.t

Possible name(s)

CSDE1

Location

R76 [2,007,024 / 2,017,041]

Sequences

Amino acid sequence

Length: 192

>Cisavi.CG.ENS81.R76.1995169-2024065.13973.p
MDALSLKVGDTVEFKICEVKRTGAKSAVDIILLTRHADFDPSSAASRRRTLSHSMSAASL
KLETLPEEAPFPLISLDDVPIKKNAAKDVTMSPKKPEADPSTNASTPKQETPETDENDSN
TEKLSDVSLSPRLENTEGSRGCFGWISTLKDTFGFIESLDHGSEIFFHYSEMQAPIEKYK
GWLPCHLSHWNQ

Nucleotide sequence

Length: 1,192

>Cisavi.CG.ENS81.R76.1995169-2024065.13973.t
TCTTTCAAGATACGATTCGGGGAAAAGGACAGAGCGGCGAACTGCTTACACACACTCTGC
AAGGGAGATCAGGTATCGTTCCTTACAATCACCGACAAGCGTAACGGGCAGCAACGCGCG
GCGGGAGTTACGCTTCTACTCGAAAAGACAATCATTGTGAGCAAGGAAAAGAGGGAACAG
GGCATAGTGGCAGCTGTAAAGGAAGGATTCGGGTTCATAAAATGTGTGGAGCGCGATTCC
CGACTCTTCTTCCACTGCTGCGAGATGCTCGATCCGGCTCACCATGTTAGGATGTCTGAC
GAAGTCCAGTTCACTGTGCTGCTCGACCCTGTGGCTGAAAAACAACGGATGCATGCTACA
AGGATAAAAGTTCTCCCAAAGGGATCTGTCATCTTCCACACGGTGACCGACCAAGCTTAC
ACTGGGATAGTTGAGACTCTACCAGGGGCTTCCCCTAATACAGTACCGAAAAGCCCCACG
GACTGCCTATTCAGCCCCGCCTCTAATGCCTCAATCCCGGCATCATAGTCTACACTGTCG
GGGCTAACCCAGCTGACCCGACTGCGGACACAGTGGCACGAGTCCCGTATGCCTCCAAGG
ATTTCAAGGACTGGATGGACGCTCTGAGTCTTAAAGTTGGCGACACTGTTGAGTTCAAAA
TATGTGAGGTGAAGCGCACTGGGGCAAAAAGCGCCGTCGACATCATACTGCTGACTCGCC
ACGCCGATTTCGATCCCAGCAGTGCTGCCAGTCGCCGAAGAACGCTGAGTCATTCCATGT
CAGCGGCATCACTGAAGTTGGAAACACTGCCAGAGGAAGCCCCCTTCCCCCTTATTTCAT
TGGATGATGTGCCAATAAAAAAGAACGCTGCCAAAGATGTAACAATGTCACCGAAAAAAC
CTGAAGCTGATCCATCCACAAACGCATCAACACCGAAGCAAGAAACTCCAGAAACTGACG
AAAACGACTCTAACACTGAAAAGTTATCAGATGTATCACTTTCACCCAGGCTTGAAAACA
CGGAAGGGTCGCGGGGATGTTTCGGATGGATCAGCACATTGAAAGATACTTTCGGGTTCA
TCGAGTCACTTGACCACGGGAGTGAGATATTCTTCCACTACAGCGAGATGCAAGCTCCGA
TCGAAAAGTACAAAGGCTGGCTGCCCTGTCACTTATCTCACTGGAATCAAAG

InterProScan

SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[141-176] 3.86E-7
Pfam
CSP_DNA-bd (IPR002059) - T[144-174] 9.1E-6
ProSitePatterns
Cold-shock_CS (IPR019844) - T[153-172] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value