Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R76....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R76.2509427-2515821.15359.t

Possible name(s)

LINGO3; MFAP3L; ROR2

Gene model

Cisavi.CG.ENS81.R76.2509427-2515821

Location

R76 [2,509,426 / 2,515,821]

Sequences

Amino acid sequence

Length: 470

>Cisavi.CG.ENS81.R76.2509427-2515821.15359.p
MLQNVNANQLTCEDAAFTQTQNVTVQEYKDARLICTTSGTPRSIVHWVTPKHEVITLDNP
DQRDLYGLSEFGDVLTVKSVRLSKTGHYKCFANNTISFANQTIALAVVLSPTSTIVYLVV
ACGAFMVAIVLNSVNMVMYICEHLEIKRQYRKILQAQEEEEKQNPPIKSRSRFMDESIAS
LNANKHYGRYDFTCQQMFLDTVIKGAHSVKKTLYDARHSDFSANVWEYAANLRDRLHIEM
PSGVQLPNISMPSISMPTITMPTISMPSIPTIQDININIEKLSTSMVQRSQTLASSVGSV
FTLKRWMQQQNASDNESRDSDDNLAESSITHVRVDVHSPETGLPPHLLDDEPPTPPDNQP
PALVELGLHQDQQKSNNNATECRENIEIDGEICDVKPKVLRKQSLKECYAEKVVKFKPQE
FYDESLAGEPFLPRLAGTGDLTSPTGDVMSPLLCTVSGAVDERYSYETSV

Nucleotide sequence

Length: 2,199

>Cisavi.CG.ENS81.R76.2509427-2515821.15359.t
ACCTTGCTCACAACAGATTAATCAAACTGGATGGCAATTCCTTCTCATATCTGTGGCATC
TTGCTAAACTTGATGTTTCCAACAATTTTCTGCAACATCTACCAGAAAGCATTGTGCGAC
CGTTTTTAAAATTACCTCCTCAAGCAAAGAAGAAGTCGATCTTGCTACAAAATAACCCCT
GGTCCTGCGATTGTTTGCAGGAAAGTTTGATTAAAACCCTTTTAAAGCACCCGAACAACT
CAATTGTTATCGTATGCAAAATACCCGAAGTACTACAAAACAGAATGTTGCAAAACGTTA
ACGCAAATCAATTGACATGTGAAGATGCTGCGTTTACCCAAACGCAAAACGTCACAGTCC
AAGAATACAAAGACGCAAGACTGATATGCACCACTTCCGGCACTCCACGGAGTATAGTCC
ATTGGGTGACACCTAAACACGAGGTGATCACCTTAGACAACCCTGATCAAAGAGATTTGT
ATGGTCTTTCAGAATTCGGAGATGTATTGACAGTCAAGTCTGTTCGACTTTCAAAAACAG
GACATTACAAGTGTTTTGCGAACAACACGATTAGCTTTGCCAACCAAACTATCGCACTGG
CAGTAGTATTAAGCCCAACCAGCACAATTGTGTACCTTGTGGTTGCTTGTGGGGCTTTCA
TGGTCGCTATTGTGCTTAACTCTGTCAATATGGTGATGTACATTTGCGAGCACTTGGAGA
TAAAGAGACAATACCGCAAGATACTACAAGCACAGGAAGAAGAGGAAAAACAAAATCCTC
CGATCAAATCGAGATCTCGGTTCATGGATGAATCGATCGCATCACTCAACGCCAATAAGC
ACTACGGAAGATATGACTTCACCTGCCAGCAGATGTTTTTGGACACAGTGATCAAAGGGG
CTCATTCGGTCAAGAAGACGCTTTATGATGCACGACACTCAGATTTCTCAGCTAATGTGT
GGGAATATGCGGCAAACTTGAGAGATCGCCTCCATATCGAGATGCCCAGTGGTGTGCAAC
TTCCAAACATCTCCATGCCTAGTATTTCCATGCCTACTATCACTATGCCCACCATATCTA
TGCCTAGCATTCCAACAATACAGGACATTAACATCAACATTGAGAAGCTGAGCACAAGCA
TGGTGCAGAGGAGTCAAACTCTCGCCTCTTCCGTCGGATCGGTTTTCACTCTGAAGAGGT
GGATGCAGCAACAGAACGCGAGCGACAATGAGAGCAGGGATTCAGATGATAATTTGGCCG
AGTCATCCATCACCCATGTCAGAGTGGATGTGCATTCCCCCGAAACTGGTCTTCCACCCC
ACCTGCTCGACGATGAGCCTCCGACACCACCCGACAACCAACCACCAGCGCTAGTTGAAC
TAGGATTGCATCAAGACCAACAAAAATCAAACAACAATGCAACCGAATGTCGCGAAAACA
TTGAAATTGACGGAGAAATTTGCGACGTCAAACCTAAAGTTCTTCGGAAGCAGAGCTTAA
AAGAATGCTACGCCGAAAAGGTGGTTAAATTCAAACCGCAAGAATTCTATGATGAATCAT
TAGCAGGAGAACCCTTTCTTCCAAGGCTGGCTGGGACAGGGGATTTGACATCTCCGACTG
GGGATGTGATGTCTCCACTTCTGTGTACGGTTAGTGGGGCCGTGGATGAACGCTATAGCT
ATGAAACGTCGGTTTAAACGCAATCGTTGTATATTTGTCGCTAGTATTCAGTGCTGAAAA
AAGTGTCCGCATCAAAACGTAATTTCATTCATGTTCTCTTAAAATATCCTTTTTAAAAAT
CCTCTTAAAATGCTCAAATTACAGCACTTATACCAGCACTGGACTAGTGTAATTTGTCTA
ATGAAATGCATGCTCGCTCTTATTACCTTTTTAAAGTCGAAAAGTCTACCGCGTGGGTGC
ACAATGCACGTTATAAAGTTCAAAGGCCCACATGGATTTGTCAAAATACAGTATTATACC
ACAATTAAACCAAGTCGTGTGTTAATTTATTCTACTACAATAAAAGTCTTCTCTAAACTT
TCTATTTTAAACAAGTCTAACCTTCCAATTCCTACTTTCCTTTACACATGTAAGCAATTG
TTCTGACCTGATTCGCACTTGTAAATATAGATATAGCAGTGTGCAATATTTATCGATTCA
CAATTTAGGAAAAACTGTGTTTTTATCGTAATTAAATCC

InterProScan

Gene3D	Ig-like_fold (IPR013783) - T[11-109] 1.6E-12
ProSiteProfiles	Ig-like_dom (IPR007110) - T[13-106] 9.137
Pfam	Ig_I-set (IPR013098) - T[18-107] 2.6E-8
SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[19-111] 1.57E-12
SMART	Ig_sub (IPR003599) - T[20-108] 1.0E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value