- Transcript 'Cisavi.CG.ENS81.R76....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R76.2824759-2832229.15603.t
Possible name(s)
EXD3; EXOSC10; WRN
Gene model
Location
R76 [2,824,758 / 2,832,229]
Amino acid sequence
Length: 586
>Cisavi.CG.ENS81.R76.2824759-2832229.15603.p
NVDEFSQQSLRSLMQFIRSSHGLPSAGDDYEFYSSFSGFRDFTLHQRSRLIKNMKALLKN
QGLKENFGASTSGINDDDDLTDQLVECNDGIIERVTALLDQKSLTNTHSYYNFRISIAAP
SQQTVVSSWNKVGKTGKSKTFRLFHAYNIMRPQLKFKDTIDNTNAPFLPKISVKPNALRP
LPRELVDIQASDKNSESEGHSLAISNLIQQIRQSKEENLAIYDHPYRFEIEQFKPMESQL
KSSTPIKYKDIDPETCRLVDKPSDLLDVLSELKSKSVIAVDLEAHSYRSFQGITCLMQLS
TREKDYIIDTLALRSELNILNEVFTDPRIVKVFHGADSDIVWLQRDFGIYVVNLFDTGQA
SRALGLARFSLDFLLTHYCNIQADKKYQLADWRVRPLPKEMLLYAQGDTHYLLYVYDMMK
IDLLKAGTGMLEKVLEKSREICLLKYEKAVTTASSHLALMEKQKRRGGKKDFNSQQLEAL
RLIYAWRDGLARQEDESCGYVLPNHMLLQIAEILPREAQGVLACCNPVPPLLRQHVLAVH
QLVLEARNKSLRSDKGGTATVESRVPVPAKTEDDYANLLQCPHDLS
Nucleotide sequence
Length: 1,844
>Cisavi.CG.ENS81.R76.2824759-2832229.15603.t
AACACAGCACACAGCTTGTGTTTAATTAGGTGCAAAAAATCCAGATCATGGATGGTAAGG
CTAGTAAAGCCCCATGTAAAATCGAAAATGTCGATGAGTTTTCCCAACAAAGTTTGCGTT
CTTTGATGCAGTTCATCAGATCCAGTCACGGGCTTCCAAGTGCGGGTGACGATTATGAAT
TTTACAGCAGCTTTTCAGGTTTCCGGGACTTTACGTTACATCAAAGAAGTCGACTAATCA
AGAATATGAAAGCACTTCTAAAAAATCAGGGTTTAAAGGAAAATTTTGGTGCAAGTACAT
CTGGAATAAACGACGATGATGATTTAACCGACCAATTGGTAGAGTGTAATGATGGGATTA
TTGAACGGGTCACTGCACTGCTGGACCAGAAGTCACTGACCAATACACACTCGTACTATA
ATTTCAGAATATCAATCGCTGCTCCAAGCCAGCAGACTGTTGTGTCTTCTTGGAACAAAG
TTGGAAAAACTGGAAAAAGTAAAACATTTCGGTTATTTCATGCATACAATATAATGCGGC
CTCAGCTTAAGTTTAAGGACACAATAGACAACACCAACGCCCCGTTTTTGCCAAAGATAT
CGGTTAAACCAAATGCATTACGTCCATTGCCAAGGGAACTCGTTGATATTCAAGCCTCAG
ACAAAAACAGCGAAAGTGAAGGCCACTCACTTGCAATATCAAACCTGATACAACAAATCC
GTCAGTCGAAGGAGGAAAACTTAGCGATCTATGACCATCCTTATCGGTTTGAAATCGAAC
AGTTCAAACCAATGGAATCTCAACTCAAATCCTCAACGCCGATTAAATACAAGGATATAG
ACCCAGAAACCTGTCGTTTGGTCGACAAGCCCAGTGATCTGTTGGATGTACTTAGCGAGT
TGAAATCAAAGTCGGTAATTGCCGTGGATTTGGAAGCCCATTCGTACAGGTCTTTTCAAG
GGATCACTTGTTTAATGCAGCTTTCTACTCGAGAGAAAGACTACATCATTGACACCCTGG
CACTTCGTAGCGAGTTGAATATTCTGAACGAAGTTTTCACCGACCCTCGGATCGTGAAGG
TTTTCCACGGAGCTGATTCTGACATCGTTTGGTTGCAACGCGATTTCGGGATTTATGTCG
TTAATCTCTTTGACACAGGCCAAGCTTCAAGAGCATTGGGTTTAGCTCGATTTTCACTTG
ATTTTCTGCTCACACATTACTGCAATATTCAAGCTGATAAGAAGTACCAATTGGCAGACT
GGAGAGTTCGCCCTCTGCCAAAGGAGATGTTGCTGTATGCCCAGGGCGACACCCATTACC
TTCTGTATGTGTACGACATGATGAAAATAGATTTGCTTAAAGCGGGAACCGGTATGCTAG
AAAAGGTTCTCGAAAAAAGCCGCGAAATTTGCCTTTTGAAGTACGAAAAGGCTGTAACCA
CGGCATCATCCCATCTTGCGCTGATGGAAAAGCAGAAACGACGTGGAGGGAAGAAGGACT
TCAACTCCCAGCAACTCGAAGCGCTGCGACTTATTTATGCCTGGAGAGACGGCTTGGCGC
GGCAGGAGGATGAAAGCTGTGGGTACGTGCTACCCAACCATATGCTGCTTCAGATCGCTG
AAATACTGCCGCGTGAAGCTCAGGGGGTGCTGGCGTGCTGTAACCCGGTACCGCCGTTGT
TGAGGCAACACGTGCTCGCCGTGCATCAGCTCGTGCTTGAGGCGAGGAACAAATCGCTCC
GGTCGGATAAAGGCGGAACGGCGACTGTGGAGTCGCGGGTTCCTGTTCCGGCGAAAACGG
AAGACGATTACGCGAACTTGCTCCAATGCCCTCACGACCTGTCC
| Pfam |
Exosome-assoc_fac_Rrp6_N (IPR012588) - T[14-102] 1.2E-15 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[149-448] 3.64E-82 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[256-424] 1.0E-47 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[257-420] 3.5E-46 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[468-550] 1.62E-22 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[473-553] 15.119 |
| SMART |
HRDC_dom (IPR002121) - T[473-553] 3.8E-14 |
| Pfam |
HRDC_dom (IPR002121) - T[476-541] 4.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOSX_HUMAN | 47.563 % | 543 | 0 |