- Transcript 'KH2012:KH.C14.125.v3...' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.1861397-1877601.07912.t
Possible name(s)
CALM2; TNNC1; TNNC2
Gene model
Location
R77 [1,861,396 / 1,876,772]
Amino acid sequence
Length: 127
>Cisavi.CG.ENS81.R77.1861397-1877601.07912.p
MRMLGQTPSEDEVSEIIKDFAEGDTMALEEFLDFMARQLNGASDKREEDLSKEFKLLLKE
TFRWYDTDADGIISWDELKMALKNTGEKIEEWEIEELMKDGDENMDKRIDFDEWINMMKE
LEGQVQC
Nucleotide sequence
Length: 759
>Cisavi.CG.ENS81.R77.1861397-1877601.07912.t
ACAGTCTCTCCCCGAAGAACTGAAAAACGAGTGCACTGGAGCCTTCGAGGTCTTCACAAA
GGAATCCACTGACGGGAAACTGGGAGCTGAAGAACTTGGCAAGGTGATGCGGATGCTGGG
CCAGACTCCAAGTGAGGATGAAGTCTCCGAGATCATCAAGGACTTCGCCGAAGGCGATAC
CATGGCTCTGGAGGAATTCCTTGACTTCATGGCCAGACAGTTAAACGGAGCATCAGATAA
ACGGGAAGAGGATCTTAGCAAGGAGTTTAAACTTCTCTTAAAAGAAACCTTCCGTTGGTA
TGATACTGACGCTGACGGTATTATTAGCTGGGATGAATTAAAGATGGCGCTAAAGAACAC
TGGAGAGAAAATTGAAGAGTGGGAGATTGAAGAGCTAATGAAGGATGGGGATGAGAACAT
GGACAAACGTATTGATTTTGATGAATGGATTAACATGATGAAAGAACTAGAAGGACAAGT
CCAGTGCTAGATCTTGAACAAAACTTTATTTTAGTCTCACTATCTCGATCTAGATTGTTT
TAACTACACGAAATGGTTATTTGTTTAAAGTAAATCATGACAATATTGCATTTTTACACA
AACGGCAAAATTGTGGATTTTTTCCATCGTAAAAGATTTACAATATGATTGGATTTGTTA
GTGATAGTCTGAGCTGAAAGTAACCTTCAAAATTATTTGTTTATGTTGTCTTACCCATAA
TTATGATGTGTAATCGATAATAAACATTAAAGTCGTTTA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[1-124] 1.74E-24 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[53-88] 12.505 - T[93-124] 9.855 |
| SMART |
EF_hand_dom (IPR002048) - T[57-85] 0.16 - T[93-121] 0.025 |
| CDD |
EF_hand_dom (IPR002048) - T[58-119] 8.38208E-10 |
| Pfam |
EF_hand_dom (IPR002048) - T[58-118] 1.9E-7 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[66-78] . - T[102-114] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 35 % | 72.8 | 2.08E-17 |
| TNNC1_HUMAN | 46.4 % | 92.8 | 4.76E-25 |
| TNNC2_HUMAN | 44.8 % | 91.7 | 1.18E-24 |