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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R77....' > 
  2. Clone 'ciad002l21' > 
  3. Transcript 'Haaura.CG.MTP2014.S4...' > 
  4. Transcript 'KH2012:KH.C14.125.v5...' > 
  5. Transcript 'Cisavi.CG.ENS81.R77....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R77.1861397-1877601.07915.t

Possible name(s)

CALM2; TNNC1; TNNC2

Gene model

Cisavi.CG.ENS81.R77.1861397-1877601

Location

R77 [1,873,404 / 1,876,798]

Sequences

Amino acid sequence

Length: 169

>Cisavi.CG.ENS81.R77.1861397-1877601.07915.p
LCNSITILLQSLPEELKNECTGAFEVFTKESTDGKLGAEELGKVMRMLGQTPSEDEVSEI
IKDFAEGWFCDTMALEEFLDFMARQLNGASDKREEDLSKEFKLLLKETFRWYDTDADGII
SWDELKARCLNTGEKIEEWEIEELMKDGDENMDKRIDFDEWINMMKELE

Nucleotide sequence

Length: 812

>Cisavi.CG.ENS81.R77.1861397-1877601.07915.t
TTATGTAACTCAATAACTATTTTATTACAGTCTCTCCCCGAAGAACTGAAAAACGAGTGC
ACTGGAGCCTTCGAGGTCTTCACAAAGGAATCCACTGACGGGAAACTGGGAGCTGAAGAA
CTTGGCAAGGTGATGCGGATGCTGGGCCAGACTCCAAGTGAGGATGAAGTCTCCGAGATC
ATCAAGGACTTCGCCGAAGGTTGGTTTTGCGATACCATGGCTCTGGAGGAATTCCTTGAC
TTCATGGCCAGACAGTTAAACGGAGCATCAGATAAACGGGAAGAGGATCTTAGCAAGGAG
TTTAAACTTCTCTTAAAAGAAACCTTCCGTTGGTATGATACTGACGCTGACGGTATTATT
AGCTGGGATGAATTAAAGGCAAGATGCTTAAACACTGGAGAGAAAATTGAAGAGTGGGAG
ATTGAAGAGCTAATGAAGGATGGGGATGAGAACATGGACAAACGTATTGATTTTGATGAA
TGGATTAACATGATGAAAGAACTAGAAGGACAAGTCCAGTGCTTAGATCTTGAACAAATC
TTCATTTTTAGTCTCACTATCTCAATCTATATTGTTTTAACTACACAAAATGGTTATTTG
TTTAAAGTAAATCATGACAATATTGCATTTTTACACAAACGGCAAAATTGTGGATTTTTC
CCATCGTAAAAGATTTACAATATGATTGGATTTGTTAGTGATAGTCTGAGCTGAAAGTAA
CCTTCAGAAATTATTTGTTTATGTTGTCTCACCCATAATTATGATGTGTCAATCGTTGGT
GTAATCGATAATAAACATTAAAGTCGTTTACC

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[8-167] 3.99E-28
SMART
EF_hand_dom (IPR002048) - T[19-48] 140.0 - T[104-132] 6.0 - T[140-168] 0.025
ProSiteProfiles
EF_hand_dom (IPR002048) - T[33-51] 7.01 - T[100-135] 10.245 - T[140-169] 10.162
Pfam
EF_hand_dom (IPR002048) - T[105-127] 2.7E-4
CDD
EF_hand_dom (IPR002048) - T[105-166] 9.97681E-9
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[113-125] . - T[149-161] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CALM1_HUMAN 35.22 % 86.3 4.42E-22
TNNC1_HUMAN 45.062 % 117 6.54E-34
TNNC2_HUMAN 42.767 % 104 4.01E-29